Search BioLiP database

Search BioLiP by

		PDB ID	e.g. 1a69

		Ligand ID	e.g. C2E

		UniProt ID	e.g. P0ABP8

		BioLiP ID	e.g. 0000574

		EC number	e.g. 2.4.2.1

		GO term	e.g. 0042802

		Ligand name	e.g. CYCLIC DI-GMP

		With binding affinity data	Please check this box to restrict your search to entries that have binding affinity data

Type the above number:

Note:

Ligand ID: This can be the standard 3-letter code of ligand (mmCIF format) (e.g. "C2E"); metal ion names (e.g., "Ca", "Na"); or the two names created in BioLiP (to avoid conflicts with the existing 3-letter ligand codes): NUC (for nucleic acids), and III (for peptide).

GO term: Please ignore the 'GO:' in GO terms and just leave the numbers.

Ligand name: The name will be searched in ligand chemical names/synonyms, which are curated from ChEBI, PubChem, and PDB databases. Click here to show all ligand names/synonyms in BioLiP.

Binding affinity: The binding affinity data are collected from the original literature, Binding MOAD, PDBbind-CN, and Binding DB databases.

Reference:

BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions

download the PDF file