Contact Prediction for target T0961

User Input

>T0961 (505 residues) [download]
MKNFYQDGPQLSNTFRSDEALQKILKSLLPADAQKVALPHLEHLGERAVTDMLTWAQEAE
SQPPVHVPFDPWGRRIDDIKTSHGWKALEKVAAEEGIVATAYDRRFGAASRVYQMALLYL
YSPSSAIFSCPLAMTDGAARALELYADADLKARVLPHLLSRDPKTFWTAGQWMTERTGGS
DVSGTSTDAHPFTGTSEFGATHSLHGTKWFTSATTSQMALTLARPDGAAPGSRGLSLFFL
ELRNDKGELNHIQIHRLKDKLGTKALPTAELSLQGTPARMIGGVGEGVKRIASVLNITRI
YNSICAVGHIRRALDLAQDYSGKRQAFGKLLKDHPLHKSTLDSLEADFRKCIAFSFFVAN
LLGQEEVGEASASEKILLRVLTPILKLYTAKKSIHISSEVVEMFGGAGYVEDTGIPRLLR
DAQVFSIWEGTTNVLSLDMLRAFEKDQAGQILEQFLVLNEAGSEELVRLQKLLTLSGEQK
EQHAREIAFLIGNAVARIAMKKYSL

ResTriplet Contact Prediction

Contact map: respre.NNB.gz (final), respre.NNB.ful.gz (initial), ResTriplet_AT.NNB.gz (human).

Secondary structure: tmpseq.aln.ss2.

MSA for full sequence: seq.hhbaln.gz (stage 1), seq.aln.gz (final).

TripletRes Contact Prediction

Contact map: TripletRes.NNB.gz (final), TripletRes.NNB.ful.gz (initial), TripletRes_AT.NNB.gz (human).

Domain partition: TripletRes.NNB.lydom.

Zhang_Contact Prediction

Contact map: Zhang_Contact.NNB.gz (final), bayes.dat.gz (Naive Bayes), respre.dat.gz (best component predictor).