Template-based Modeling Results for YTFR_ECOLI

Submitted Primary Sequence

>Length 500
MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVELLFDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQVAEIPLAELSVPAIMNAIAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVELLFDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQVAEIPLAELSVPAIMNAIAA
CCCCCCCCEEEEECCEEECCCCEEECCCEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEECCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCEEEEEECCCEEEEEEHHCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEECCCCHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCEEEEEECCEEEEEECHHCCCHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVELLFDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQVAEIPLAELSVPAIMNAIAA
55334332002021001101102002301020230100000011110100001000001122401000311202141111025010000001011022010000000022133101032320131013003202021214231320110111000002002120200001111011323102100200220353210000000002101200110000121100001212201122001111013032101332242223322001022114432111000201101000000011100000000000023232020003122021410210032000001222322101010002200000102220212102332123002200330203022232213202211111010010022211000011002101110101002002100422100000002032002101000001231000102422022100120115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVELLFDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQVAEIPLAELSVPAIMNAIAA
1	MUSTER	3ozxA	0.191	0.910	1.801	threading_1	----------E-GEVIHRY-KVNGFKLFGLPPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDPNSKV------GKDEVLKRGIYNYFKELNELKIVHKIQYVEYASKFLKGTILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYLPAEIRPDEIKFMLKLKTKMKWTKIIGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKP----------RIFPN-------YDGTVQQYLENAS-----KDALSTS---SWFFEEVTKRLNL-HRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTREKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGLATSPVTLKTGMNEFLE
2	SPARKS	1yqta	0.194	0.898	5.637	threading_2	-----------EEDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNGDNDSWDGVIRAFRGYFEKLKNGPVVKPQYVDLIPKAVKGKVIEL---------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGRPYEIKFTKTGERVEIERETLVTYPRLVGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDASKLNS---------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLA-SIG
3	PROSPECT2	1yqtA	0.191	0.900	4.234	threading_3	EE-----------DCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVIEL---------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFSQPKGTRNFLRGYLKDENVRFRPYEIKFTKTGRETLVTYPRLVGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDL--------------TVAYKPQYIK---ADYEGTVYELLSKIDASKLNS---------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLASIGA
4	PPA-I	3ozxA	0.182	0.910	4.352	threading_4	-----------EGEVIHRY-KVNGFKLFGLPPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDPNSKVKRFRGKEFKELYSNELKIVHKIQYVEYASKFL-------KGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKPAENMKIRPDEIKFMLKLKTKMKWTKIIGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKP----------------QRIFPNYDGTVQQYLENASKDALSTSS--------WFFEEVTKRLNL-HRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTREKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGLATSPVTLKTGMNEFLR
5	HHPRED-l	1yqt_A	0.200	0.882	2.356	threading_5	----------E-EDCVHRYGVNAVLYRLP-VVKEG-VVGIVGPNGTGKSTAVKILAGQLIPNLDNDSWDGVIFRGNELEKLKNGEIRPVVKPQDLIPKAVKGKVIELL---------KKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYIFSQPKGTRNGILRGYLKDENVRKFTKTGERVEIERETLVTYPDY-GSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDAS---------KLNSNFYKTELLKPLGI-IDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKEKTALVVEHDVL-IDYVSDRL-VFEPGKYGRALPP---REG-NRFLIG-
6	HHPRED-g	1yqt_A	0.201	0.874	2.182	threading_6	---------------EED--CVHRYGVNAFVLYEG-VVGIVGPNGTGKSTAVKILAGQLIPNLDNDSWDGVIRAFRGLQEKGEIRPVVKPQYVDLIPKAVKGKVIELLK---------KADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGYLKDENVPYTGERVEIERETLVTYPRLVKDFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKP---QYIKADYEGTVYELLSKIDASK---------LNSNFYKTELLKPLGIID-LYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKEKTALVVEHDVL-IDYVSDRL-VFEPGKYGRALP-P---REG-NRFLAS
7	SP3	1yqta	0.192	0.898	5.852	threading_7	----------E-EDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCNDSWDGVIRAFRGKLKNGEIRPVVKPQYVDLIPKAVKGKVIEL---------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGRPYEIKFTKTGERVEIERETLVTYPRLVGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDASKLNS---------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLA-SIG
8	SAM-T99	1g6hA	0.296	0.486	2.529	threading_8	-----TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGELFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDPKVVEIYIG
9	MUSTER	3bk7A	0.203	0.906	1.572	threading_9	LPEQLDE------DCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVELQNYFERLKNGIRPVVKPVDLLPKAKVRELLKKVDEVGK------------FEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSKPKGTRNGINEFL-RPYEIRFTKLSERVDVERETLVEYPRLVKSFKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT--------------VAYKPQYIK---AEYEGTVYELLSKIDSSKLNS---------NFYKTELLKPLGII-DLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKEKTALVVEHDVLMIDYVSDRLIVFE-GRALPPMGMREGMNRFLASVGIT
10	SPARKS	1g6ha	0.301	0.478	3.552	threading_10	-----TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEELSDPKVVEIYIGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.589 to 1sgwA SCOP code=c.37.1.12	TM-score=0.574 to 1sgwA SCOP code=c.37.1.12	TM-score=0.559 to 1sgwA SCOP code=c.37.1.12	TM-score=0.564 to 1sgwA SCOP code=c.37.1.12	TM-score=0.578 to 1sgwA SCOP code=c.37.1.12