Template-based Modeling Results for YTFM_ECOLI

Submitted Primary Sequence

>Length 577
MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLSTIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGVPVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEYESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLSTIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGVPVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEYESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCEEEECCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEEECCEECCCCCCCCEEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEECCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLSTIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGVPVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEYESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL
5411200000000000000012302020211223013102200211323322233201120130013004311101010101022235433110002023222010010101021224324301311322122121013210220131002002331112010020101113322200010002313201001010222323330021103134123232310120031023122101010012234244321000101022234220100000013211201010220001220100101001123321010001011143323210001000111213322010010000111202211210000100012022232222100011000001111311111221200100011012122220100002020010110233110001010000111223401110100010121120131220013123122210110000001010102230100000000100231442202000000010101000000000010244444100000010244
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLSTIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGVPVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEYESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL
1	MUSTER	2qdzA	0.162	0.825	1.936	threading_1	-------------------------------------------------QLLPGARDLNRIDDRQRKEQLQR---------DIERAA-----------TSGHTVTVHAVDLDF-GVEGRLFDPAPL--VQDYLNRPLDNEQLFLLVKALSAALYDRGYATSIVTFVPPGVVDG----VLKLKVEWG---RIKGWLIDGKPLERMMVFSAMPGWQDKVLNVFDIDQAIYNINNGGKTGNITIVP----ADEYGYSYLDLQLQRRALPRVSLGMDNSGPGRYKYNASVTANDLLGLNDTLGLYIGNRYYRDNYDLMYSVPLGRTRLDLQTGYSTYRNLLKTRYGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNYLAGTRKHYSDVTVGMQYSTQR----GANAYFGDLSFTRGVGV--GNVSRFNGSLAWTRYMALAGQP-IQWASQLGFQYSRQ--QLLNSYQITVGDEYTVRGYNLRTSQ---------SGDSGVYLSNTLTVPVQASVAPFVGADVGALKSNHPDAIRMAGLAAGVRFDLPYARMSFTYSKPVGAQPGAPVWLYINAGLSF
2	SPARKS	2qdza	0.133	0.844	4.396	threading_2	-------------------------------------------------QLLPGARDLNRIDDRQRKEQLQR-----------DIERAAT---------SGHTVTVHAVDLDFGVEGRLFDPAP---LVQDYLNRPLDNEQLFLLVKALSAALYDRGYATSIVTFV----PPGVVDGVLKLKVEWG---RIKGWLIDGKPLERMMVFSAMPGWQDKVLNVFDIDQAIYNINNGG----KTGNITIVPADEYGYSYLDLQLQRRALPRVSLGMDNSGPGRYKYNASVTANDLLGLNDTLGLYIGNRYYRRNYDLMYSVPLGRTRLDLQTGYSTYRNLLKTRYSAGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKAGTRLDVSSKHYSDVTVGMQYSTQRGANAYFGDLSFTRGVG--VGNVSRFNGSLAWTRYMALA-GQPIQWASQLGFQYS--RQQLLNSYQITVGDEYTVRGYNLRTSQSGDSGVYLSNTLTVPVQFSLLGK--QASVAPFVGADVGALKSNHPDARRMAGLAAGVRFDLPYARMSFTYSKPVGAQPGAPVWLYINAGLSF
3	PROSPECT2	2qdzA	0.135	0.849	4.905	threading_3	----------------------------------------------QLLPGARDLNRIDDRQRKEQLQRD-----------------------IERAATSGHTVTVHAVDLDFGVEGRLFDPAP---LVQDYLNRPLDNEQLFLLVKALSAALYDRGYATSIVTFVPPGVVDG----VLKLKVEWGRIKGWLIDGKPLEGRDRMMVFSAMPGWQDKVLNVFDIDQAIYNINNGGKTGNITIVP----ADEYGYSYLDLQLQRRALPRVSLGMDNSGPGTPKYNASVTANDLLGLNDTLGLYIGNRYYRRNYDLMYSVPLGRTRLDLQTGYSTYRNLLKTRYGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNLAGTRLDVSSKHYSDVTVGMQYSTQRGANAYFGDLSFTRGVG--VGNVSRFNGSLAWTRYMALA-GQPIQWASQLGFQYSRQ--QLLNSYQITVGDEYTVRGYNLRTSQSGDSGV--YLSNTLTVPVQFSLLGKQASVAPFVGADVGALKSNHPDARTIAGLAAGVRFDLPYARMSFTYSKPVGAQPGAPVWLYINAGLSF
4	PPA-I	2qdzA	0.148	0.844	2.897	threading_4	-------------------------------------------------QLLPGARDLNRIDDRQRKEQLQ--------------------RDIERAATSGHTVTVHAVDLDFGVEGRLFDPAP---LVQDYLNRPLDNEQLFLLVKALSAALYDRGYATSIVTFVPPGVVDG----VLKLKVEWG---RIKGWLIDGKPLERMMVFSAMPGWQDKVLNVFDIDQAIYNINNGGKTGNITIVP----ADEYGYSYLDLQLQRRALPRVSLGMDNSGPGRYKYNASVTANDLLGLNDTLGLYIGNRYYRRNYDLMYSVPLGRTRLDLQTGYSTYRNLLKTRYGQSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNYAGTRLDVSSKHYSDVTVGMQYSTQRGANAYFGDLSFTRGVGV--GNVSRFNGSLAWTRYMALAGQ-PIQWASQLGFQYS--RQQLLNSYQITVGDEYTVRGYNLRTSQSGDSGVYLSNTLTVPVQFSLLGK--QASVAPFVGADVGALKSNHPDARRMAGLAAGVRFDLPYARMSFTYSKPVGAQPGGAVWLYINAGLSF
5	HHPRED-l	2qdz_A	0.158	0.809	7.761	threading_5	-----------------------------QLLPGARDLNR-----------IDDRQRKEQLQRDIERA-----------------------------ATSGHTVTVHAVDLDFGVEGR-LFDPAPL--VQDYLNRPLDNEQLFLLVKALSAALYDRGYATSIVTFVPPGVVD--G--VLKLKVEWGR---IKGWLIDGKLEGTRDRMMAMPGWQDKVLNVFDIDQAIYNINNGG--KTGNITI--VPADEYGYSYLDLQLQRRALPRVSLGMDNPENGRYKYNASVTANDLLGLNDTLGLYIGNRYAERNYDLMYSVPLGRT----RLDLQTGYSTYRNYAGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNYGTVSSKHYSDVTVGMQYSTQR----GANAYFGDLSFTRGVG-----GNVSRFNGSLAWTRYMGQPIQWASQLGFQY----SRQQLLNSYQITVGDEYTVRGYNLRTSQS---------GDSGVYLSNTLTVPVQASVAPFVGADVGALKSNHPRTIRMAGLAAGVRFDLPYARMSFTYSKPVGAQGPRAPVWYINAGLS-
6	HHPRED-g	2qdz_A	0.141	0.813	6.107	threading_6	--------------------------------------------QLLPGARDLNRIDDRQRKEQLQRDIERA-------------------------ATSGHTVTVHAVDL--DFGVEGRLFDPAPL-VQDYLNRPLDNEQLFLLVKALSAALYDRGYATSIVTF--VPPGVVDG--VLKLKVEWGR---IKGWLIDGKPEGTRDRMMAMPGWQDKVLNVFDIDQAIYNINNGG--KTGNITIV--PADEYGYSYLDLQLQRRALPRVSLGMDNTPENGYKYNASVTANDLLGLNDTLGLYIGNRYAERNYDLMYSVPLGRT-RLDLQTGYSTYRNGQYQAGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNAGSSKHYSDVTVGMQYSTQRGANAYFGDLSFTRGVG-----------GNVSRFNGSLAWTRYAGQPIQWASQLGFQYSR----QQLLNSYQITVGDEYTVRGYNLRTSQS---------GDSGVYLSNTLTVPVQASVAPFVGADVGALKSNHPDTIRMAGLAAGVRFDLPYARMSFTYSKPVGAQGGRAPVWYINAGLSF
7	SP3	2qdza	0.145	0.825	4.921	threading_7	-------------------------------------------------QLLPGARDLNRIDDRQRKEQLQR---------DIERAAT-----------SGHTVTVHAVDLDFG-VEGRLFDPAPL--VQDYLNRPLDNEQLFLLVKALSAALYDRGYATSIVTF----VPPGVVDGVLKLKVEWG---RIKGWLIDGKPLERMMVFSAMPGWQDKVLNVFDIDQAIYNINNGGKTGNITIVP----ADEYGYSYLDLQLQRRALPRVSLGMDNSENGRYKYNASVTANDLLGLNDTLGLYIGNRYYRRNYDLMYSVPLGRTRLDLQTGYSTYRNLLKTRQSAGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNYVSSKHYSDVTVGMQYST----QRGANAYFGDLSFTRGVG--VGNVSRFNGSLAWTRYMALA-GQPIQWASQLGFQYS--RQQLLNSYQITVGDEYTVRGYNLRTSQ---------SGDSGVYLSNTLTVPVQASVAPFVGADVGALKSNHPDARRMAGLAAGVRFDLPYARMSFTYSKPVGAQPGAPVWLYINAGLSF
8	SAM-T99	3efcA	0.130	0.319	3.687	threading_8	---LPRNRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVKQKLAGDLETLRSYYLDRGYARFNISTQVSLTPDKKGIYVTVNITEGDQYKLS--GVEVSGNLAGHSAEIEQL-TKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQ-SMPEINDADKTVKLRVNVDAGNRFYV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	3efcA	0.143	0.459	1.039	threading_9	IRALFATGNFETLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR-NRVDLKLVFQEGVSAEIQQINIVGN-HAFTTDELISHFQLRVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLGY-AYPRVQSMPEINDADKTVKLRVNVDAGNRFYV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	3njta	0.142	0.757	2.721	threading_10	-------------------------------------------------SLLPGARDLNRIDDRQRKEQLQR-----------DIERAHA------------------VDLDFGVEGRLFDPAPLVQDY---LNRPLDNEQLFLLVKALSAALYDRGYATSIVTFVPPGVVDGV----LKLKVEWG---RIKGWLIDGKPLERMMVFSAMPGWQDKVLNVFDIDQAIYNINNGG----KTGNITIVPADEYGYSYLDLQLQRRALPRVSLGMD---NSRYKYNASVTANDLLGLNDTLGLYIGNRYYRRNYDLMYSVPL---GRTRLDLQTGYSTYRNLLQSAGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNYLKHYSDV--TVGMQYSTQRG------ANAYFGDLSFTRGVGVGNVSRFNGSLAWTRYMALA-GQPIQWASQLGFQYSRQQLL--------------------------NSYQIVYLSNTLTVPVQFSLLGKQASVAPFVGADVGALKSNHPDARRMAGLAAGVRFDLPYARMSFTYSKP-----PVWLYINAGLSF--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.497 to 1phoA SCOP code=f.4.3.1	TM-score=0.477 to 1h6s1 SCOP code=f.4.3.1	TM-score=0.494 to 1h6s1 SCOP code=f.4.3.1	TM-score=0.502 to 1phoA SCOP code=f.4.3.1	TM-score=0.501 to 1phoA SCOP code=f.4.3.1