Template-based Modeling Results for YTFL_ECOLI

Submitted Primary Sequence

>Length 447
MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCCCCHHHHCCCCCEECCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA
211000000000000000000000001023110210143232202201201320210000010000000000000011000100220023101230021000000000000000001100021002110200011000002000100100010010001000300413224444112310210021024222133311200210021321201101012310000113231310132014231010000242222000000011002201333222130021023000002212012002102421310000001111020000011001200120223223431111232000020201031004003033124212110000000100430144221020210202001034220110001213343322234233243444335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA
1	MUSTER	3oi8A	0.224	0.340	1.138	threading_1	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNV--LKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYFNPEQ---FHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE---------------------------------------------------------------------------------------------------------------------
2	SPARKS	3oi8a	0.217	0.340	3.278	threading_2	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNVLK--ENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYF---NPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE---------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	3oi8A	0.217	0.340	1.710	threading_3	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNV--LKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLK---YFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE---------------------------------------------------------------------------------------------------------------------
4	PPA-I	3oi8A	0.217	0.340	3.212	threading_4	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNV--LKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLK---YFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE---------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	3lhh_A	0.322	0.264	2.322	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TISSL-VPRSDIVFLDLNLPLDANLRTV-QSPHSRFPVCRNNVDD-VGIISAKQLLSESIAG--ERLELVDLVKNCNFVPNSLSG-ELLEHFRTTGSQ-VFVVDEYGDLKGLVTLQD--DALTGEFF--------------------------------------------------------------------------------------------------------------
6	HHPRED-g	3lhh_A	0.322	0.264	2.171	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TISSL-VPRSDIVFLDLNLPLDANLRTV-QSPHSRFPVCRNNVDD-VGIISAKQLLSESIAGER--LELVDLVKNCNFVPNSLSG-ELLEHFRTTGSQ-VFVVDEYGDLKGLVTLQD--DALTGEFF--------------------------------------------------------------------------------------------------------------
7	SP3	3oi8a	0.224	0.340	2.844	threading_7	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNVLK--ENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYFNPEQ---FHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE---------------------------------------------------------------------------------------------------------------------
8	SAM-T99	3lv9A	0.234	0.286	3.688	threading_8	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FEFEEKKIREI-VPRTDV-CIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN--KIELEEILRDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI---------------------------------------------------------------------------------------------------------------
9	MUSTER	3ocmA	0.226	0.327	1.091	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFG-VEERNVSGVLTLAERSIRSIT-PRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVRRNR---LRDPIIVHESIGI-LRLDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP--------------------------------------------------------------------------------------------------------
10	SPARKS	3ocma	0.219	0.327	2.924	threading_10	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFG-VEERNVSGVLTLAERSIRSIT-PRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVR---RNRLRDPIIVHESIGI-LRLDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP--------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.501 to 2rc3C SCOP code=d.37.1.1	TM-score=0.501 to 2rc3C SCOP code=d.37.1.1	TM-score=0.509 to 2rc3C SCOP code=d.37.1.1	TM-score=0.510 to 2rc3C SCOP code=d.37.1.1	TM-score=0.510 to 2rc3C SCOP code=d.37.1.1