Template-based Modeling Results for YTFJ_ECOLI

Submitted Primary Sequence

>Length 184
MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQKLLK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQKLLK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEECCCCEECCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQKLLK
5422201000000000000012032133012010233010002432010321212212110000000023221321021002002223123331100000002101100010021003333531220100001301011113034320000001341200102212123310220131034215
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQKLLK
1	MUSTER	2hyxA1	0.172	0.946	1.325	threading_1	MEIREQLNLGGIVNAQNAQAAQLESCGTAPDLKGITGWLNTPGNKPIDLK-----SLRGKVVLIDFWAYSCINCQRAIPHVVGWYQA-YKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYP---IALDNNYATWTNYRNR-YWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAK
2	SPARKS	3kh7a	0.149	0.804	1.598	threading_2	---------------VPRGSHMLLIGKPFPAFDLPS-----VQDPA---RRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQGV------VIYGINYKD----DNAAAIKWLNELH--NPYLLSISDADGTLGLDLGVYGAPETYLI-DKQGIIRHKIVGVVDQKVWRELAPLYQQLLD
3	PROSPECT2	2b5xA	0.122	0.804	1.455	threading_3	MK----------------------LRQPMPELTGEK---AWLNG-----EVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKY--QDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQP---IFVDSDHALTDAFEN-EYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAETE
4	PPA-I	2b5yA	0.108	0.804	1.793	threading_4	----------------------MKLRQPMPELTGEK---AWLNGEVTREQL-----IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKY--QDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQP---IFVDSDHALTDAFENE-YVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAETE
5	HHPRED-l	1kng_A	0.224	0.777	1.568	threading_5	--------------------------RPAPQTALPPLEGLQA--DNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD-K---RFQ-LVGINYKDAA----DNARRFLGRY--GNPFGRVGVDANGRASIEWGVYG-VPETFVVGREGTIVYKLVGPITPDNLRSVLPQMEKAL-
6	HHPRED-g	2hyx_A	0.166	0.853	1.482	threading_6	-------NLGAQLSNCSDGAAQLESCGTAPDLKLNT-----PGNKPIDL-----KSLRGKVVLIDFWAYSNCQRAI--PHVVGWYQ-AYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYP---IALDNNYATWTNYRNRY-WPAEYLIDATGTVRHIKFGEGDYNVTET---LVRQLLN
7	SP3	3kh7a	0.153	0.815	1.271	threading_7	MLDPSELP-------------SALIGKPFPAFDLPS-----VQDPA---RRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQGV------VIYGINYKD----DNAAAIKWLNE--LHNPYLLSISDADGTLGLDLGVYGAPETYLI-DKQGIIRHKIVGVVDQKVWRELAPLYQQLLD
8	SAM-T99	1ba2A2	0.216	0.728	0.598	threading_8	-------------------ASDNVLGGKIAGDYIAKK-----------------AGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLASQPA------DFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDG----TPDGEKAVNDGKLAATIAQ----
9	MUSTER	2hyxA	0.172	0.946	1.312	threading_9	MEIREQLNLGGIVNAQNAQAAQLESCGTAPDLKGITGWLNTPGNKPIDLK-----SLRGKVVLIDFWAYSCINCQRAIPHVVGWYQA-YKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYP---IALDNNYATWTNYRNR-YWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAK
10	SPARKS	1st9a	0.161	0.745	1.494	threading_10	------------------------EGSDAPNFVLED-----TNGKRIE-----LSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKH-F-KSQGVEIVAVNVGE----SKIAVHNFMKS--YGVNF-PVVLDTDRQVLDAYDVSPLP-TTFLINPEGKVVKVVTGTMTESMIHDYMNLIKP---

Predicted Tertiary Structure


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TM-score=0.793 to 2b5yA SCOP code=c.47.1.10	TM-score=0.887 to 2b5yA SCOP code=c.47.1.10	TM-score=0.761 to 1kngA SCOP code=c.47.1.10	TM-score=0.827 to 2b5yA SCOP code=c.47.1.10	TM-score=0.888 to 2b5yA SCOP code=c.47.1.10