Template-based Modeling Results for YTFE_ECOLI

Submitted Primary Sequence

>Length 220
MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE
CCCCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE
5524332102002201300200230200100113210130034341213100210141242323331320102200110022012202310220131012014122332210200030022013201410231131001002302223120101101210230130021023002312122200100200020023002001200011110001202424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE
1	SPARKS	2k5ea	0.224	0.305	1.246	threading_1	KFTKDMTFAQALQTHPGVAGVLRSYNLGIGCMGNESLEQGANAHGLNVEDILRDLNALALEHHHHHH---------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	3caxA1	0.164	0.664	1.367	threading_2	LPEGH----------------------------------------------------------------------PLKTLYQENKEIMKDAEMLNLYAKTLATDERMREEILGVLEEIVSSLRMVGFTHYNREEMLIFPYIERR---GLTVIATVLWTKHDEIRAMIKQLAELLRKREEMPWE-EFVEKFKAKAGEVAFALSDMVFRENNIFYPTLKALT
3	SPARKS	2k53a	0.172	0.291	1.209	threading_3	KITKDMIIADVLQMDRGTAPIFINNGMH--CLGGESIEDACAVHGIDADKLVKELNEYFEKKEVLE----------------------------------------------------------------------------------------------------------------------------------------------------------
4	PPA-I	3caxA1	0.169	0.645	1.701	threading_4	--------------------------------------------------------------------------LPLKTLYQENKEIMKDAEMLNLYAKTLATDERMREEILGVLEEIVSSLRMVGFTHYNREEMLIFPYIERR---GLTVIATVLWTKHDEIRAMIKQLAELLRKREEMPWE-EFVEKFKAKAGEVAFALSDMVFRENNIFYPTLKALL
5	PROSPECT2	1t33A	0.109	0.873	1.194	threading_5	MNIPTTTKSQLIAA---ALAQFGEYGLH------ATTRDIAALAGQNIAAITYYFG--------------SKEDLYLACAQWIADFLGEKFRPH---AEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDHTHLTRLVAAYTGCDANDTRMILHTHALLGEVEEKAELIYQTVTCHIDLILHGLT--Q
6	HHPRED-l	3cax_A	0.174	0.655	4.251	threading_6	---------------------------------------------------------------------LPEGHPL-KTLYQENKEIMKDAEMLNLYAKTLATTKDEREEILGVLEEIVSSLR-MVGTHYNREEMLIFPYIERRG---LTVIATVLWTKHDEIRAMIKQLAELLRKREEMPW-EEFVEKFKAKAGEVAFALSDMVFRENNIFYPTLKAL-
7	PPA-I	3kkdC	0.085	0.905	1.256	threading_7	------GSEQRRQAILDAARLIVRDGVR-----AVRHRAVAAEAQVPLSATTYYF---------KDIDDL-ITDTFALFVERNAEALSAFWSSVEGDLQEAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLTSIILQEYQGLVDGVEQLAVDERAILRRYLNLV
8	HHPRED-g	3cax_A	0.172	0.659	3.472	threading_8	---------------------------------------------------------------------LPEGHP-LKTLYQENKEIMKDAEMLNLYAKTLATTKDEREEILGVLEEIVSSL-RMVGTHYNREEMLIFPYIERRG---LTVIATVLWTKHDEIRAMIKQLAELLRKREEMPWE-EFVEKFKAKAGEVAFALSDMVFRENNIFYPTLKALL
9	PROSPECT2	2bkuB2	0.065	0.982	1.153	threading_9	----TDTVAETSASSTFVMDKLGQTMSVDENQLTLEDAQSLQELEPVADMLMGLFFRLLEKKDSAFIEDDYLETFSPYLLKALNEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYGTIFQFIAQVAEDPQLYSEDAQDWVIDYIKRTR
10	SAM-T99	3caxA	0.185	0.614	2.612	threading_10	-------------------------------------------------------------------------------LYQENKEIMKDAEMLNLYAKTLATTKDE--RMREEILGVLEEIVSSLRMHYNREEMLIFPYIERRGL---TVIATVLWTKHDEIRAMIKQLAELLRKREEMPWEEFVEK-FKAKAGEVAFALSDMVFRENNIFYPTLKALL

Predicted Tertiary Structure


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TM-score=0.408 to 2fi0A SCOP code=a.248.1.1	TM-score=0.588 to 1h6gA SCOP code=a.24.9.1	TM-score=0.402 to 2fi0A SCOP code=a.248.1.1	TM-score=0.598 to 1h6gA SCOP code=a.24.9.1	TM-score=0.842 to 1t33A SCOP code=a.4.1.9