Template-based Modeling Results for YSAA_ECOLI

Submitted Primary Sequence

>Length 157
MNRFIIADATKCIGCRTCEVACAVSHHENQDCAALSPDEFISRIRVIKDHCWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNRFIIADATKCIGCRTCEVACAVSHHENQDCAALSPDEFISRIRVIKDHCWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV
CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEECCCCEEEEECCCCCCCCCHHHHHCCCCCEEECCCEEEECCCCCCCCHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNRFIIADATKCIGCRTCEVACAVSHHENQDCAALSPDEFISRIRVIKDHCWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV
4211000012301003000100031333333221011121122121243211000100120320000310113001233100001323020010002001110010122333120000110133321000021011300101213212323244234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNRFIIADATKCIGCRTCEVACAVSHHENQDCAALSPDEFISRIRVIKDHCWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV
1	MUSTER	2vpzB	0.294	0.975	4.144	threading_1	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIRER-EVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHPA---GYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKA
2	SPARKS	1h0hb	0.237	0.968	5.357	threading_2	-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENTLVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHATGCVLFTPKDLEDYESVISACPYDVPRKVAE--SNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASAR--L
3	PROSPECT2	2vpwB	0.301	0.975	3.016	threading_3	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHP---AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPEAKALKAAER
4	PPA-I	2vpzB	0.288	0.975	8.265	threading_4	PRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHPA---GYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKA
5	HHPRED-l	1kqf_B	0.266	0.981	4.117	threading_5	KAEVKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDN--RVYKCTLCVSVGQEPACVKTCPTGAIHFGTKKEMLELRVAKLK-
6	HHPRED-g	2ivf_B	0.252	0.987	4.704	threading_6	RQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTRWNNVTTYQGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQT--SEKCILCYPRGIANACNRQCPGRVRAFGYLDDTTSHVHKLVKK
7	SP3	1h0hb	0.234	0.981	4.824	threading_7	-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTEYKLVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHATGCVLFTPKDLEDYESVISACPYDVPRKVAE--SNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASARLAE
8	SAM-T99	2vpzB	0.289	0.968	5.183	threading_8	-RYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIRERE-VGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYL---HPAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKA
9	MUSTER	1ti4B1	0.216	0.975	3.709	threading_9	MQYYMVIDVAKCQDCNNCFMGCMDEHELNEGHRWMNIERR-ERGTYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQEDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEE--NVAQKCTMCAHLPKMPRCAHNCGSFVYEFLKTPEAMAKKVEEEGL
10	SPARKS	1kqfb	0.281	0.975	5.172	threading_10	AEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKE--DNRVYKCTLCVDRGQEPACVKTCPTGAIHFGTKKEMLELAEQR--V

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.758 to 1ti4B SCOP code=b.3.5.1	TM-score=0.771 to 1ti4B SCOP code=b.3.5.1	TM-score=0.822 to 1h0hB SCOP code=d.58.1.5	TM-score=0.785 to 1ti4B SCOP code=b.3.5.1	TM-score=0.769 to 1ti4B SCOP code=b.3.5.1