Template-based Modeling Results for YRBL_ECOLI

Submitted Primary Sequence

>Length 210
MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLIPLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLIPLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA
CEECCCCCEECCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEEECCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLIPLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA
212133321002132120010241222001001232432132022102101212332331210000000011210100001001122142121022003213233201201300320141003120000102020000122333410000011012220000010031002210220033001101001012331333223212222444
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLIPLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA
1	MUSTER	3igoA1	0.211	0.724	1.564	threading_1	QGTFAERCMLGKGSFGEVLKCITQQEYAVKVINKASKNKTSTILREVELLKKL-----DHPNIMKLFEILEDSSSFYIVGELYTG-----GELFDEIIKRKRFSHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLE-SKEKDCDIKIID-FGLSTCFQQNT----------------------------------------------
2	SPARKS	3h9fa	0.175	0.924	1.711	threading_2	GRIYSILKQIGSGGSSKVFQVLNEQIYAIKYVNLEDNQTLDSYRNEIAYLNKLQQHS---DKIIRLYDYEITDQYIYMVMEC-------GNIDLNSWLKKKKSPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-----DGMLKLID-FGIANQMQSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFDIPEKDL
3	PROSPECT2	2ppqA	0.089	0.967	1.254	threading_3	QYDVGSLTSYKGIAENSNFLHTTKDPLILTLY---EKKNDLPFFLGLQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLEGWLRKPEAKHCREVGKRPNALSVDGWKVLWDKSEERADEVEVIHADLFQDNVFFL----GDELSGLIDCFEKDGAYNVTKGKALLEGEAELEALPLLSRGSALRFFLTRLYDWLTTPAGALVVKKA
4	PPA-I	2ac3A1	0.171	0.695	2.170	threading_4	VYQLQE-DVLGEGAHARVQTCINLITYAVKIIEKQPGHIRSRVFREVEMLYQCQ----GHRNVLELIEFFEEEDRFYLVFEKMRG-----GSILSHIHKRRHFNLEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP-VKICD-FDLGS----------------------------------------------------
5	HHPRED-l	2hy0_A	0.135	0.881	1.300	threading_5	VEDWDLVQTLGEGAYGEVQLAVNEEAVAVKIVDMK------NIKKEICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR--IEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE----RDNLKISD-FGLATVFRYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA-
6	HHPRED-g	1koa_A	0.165	0.895	1.132	threading_6	LDHYDIHEELGTGAFGVVHRVTTGNNFAAKFVMTPHESDKETVRKEIQTMSVL-----RHPTLVNLHDAFEDDNEMVMIYEFMSGG------ELFEKVADEMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK--LID-FGLTAHLDPKQSVKVTTGTAE-------FAAPEVAEGKPVG-YYTDMWSVGVLSYIL
7	SP3	1jksa	0.173	0.938	1.743	threading_7	QENVDDYEELGSGQFAVVKKCSTGLQYAAKFIKSRRGVSREDIEREVSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGE------LFDFLAEKESEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID-FGLAHKIDTYILLSGATKQETLANVSAFEDEYALAKDFIRRLLVKDPKK-RMTIQDS
8	SAM-T99	2bdwA	0.168	0.881	1.177	threading_8	---YDVKEELGKGAFSVVRRCVHGLEFAAKIINTKKLSAFQKLEREARICRKL-----QHPNIVRLHDSIQEESFHYLVFDLVTGGE------LFEDIAREYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK-GAAVKLAD-FGLAIEVNGFAGTPGYLSPEVLKK---------DPYSKPVDIWACGVILYILLVGYP
9	MUSTER	3h9fA1	0.184	0.700	1.547	threading_9	GRIYSILKQIGSGGSSKVFQVEKKQIYAIKYVNLEEADTLDSYRNEIAYLNKLQQH---SDKIIRLYDYEITDQYIYMVMEC-------GNIDLNSWLKKKKSPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-----DGMLKLID-FGIANQMQPD-----------------------------------------------
10	SPARKS	3coka	0.146	0.848	1.699	threading_10	IEDFKVGNLLGKGSFAGVYRAHTGLEVAIKMIDKKKAGMVQRVQNEVKIHCQLKHPS-----ILELYNYFEDSNYVYLVLEMCHNGE------MNRYLKNRVKPNEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN----IKIAD-FGLATQLKE----------------SDVWSLGCMFYTLLIGRPPFDTDTVKVVLADY

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.707 to 1qcfA SCOP code=b.34.2.1	TM-score=0.714 to 1v0bA SCOP code=d.144.1.7	TM-score=0.678 to 1snxA SCOP code=d.144.1.7	TM-score=0.524 to 2ppqA SCOP code=d.144.1.6	TM-score=0.715 to 1snxA SCOP code=d.144.1.7