Template-based Modeling Results for YRAQ_ECOLI

Submitted Primary Sequence

>Length 346
MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF
5533322322121310100000000000000020111102000001211002000120221202100110010010001000000000000210023310130013240200000000000010020000000100233401100000000000100000000000000000000100000000010110022112212323222313223221110120021001101100000000000000012100220001022110000000000000000001100001000221000000000000000000110000120011100000000000000000001212
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF
1	MUSTER	3zuxA	0.156	0.835	1.008	threading_1	ILSKISSF----IGKTFSLWAALFAAAAFFAFKWAGPYIPWLLGIIMFGMGLTL----KPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLN-------LP-------AEIAVGVILVGCCPGGASNVMTYLARGNVALSVAVTSVST-PLLTPAIFLMLALEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGS--------------------------KTEKLTDALPLVSVAAIVLIIGAVV--GASKGKI----MESGLLIFAVVVLHNGIGYLLGFFAAKWT-GLPYDAQKALTIEVGMQNSGLAAALAAAHFA-VVAVPGALFSVWHNISGSLLATY
2	PROSPECT2	1jdha	0.087	0.994	1.777	threading_2	AVVNLIKKEASRHAIMRSPQMVSAIVRTMQNTNDVESHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLVKFLAITTDCLQILAYGNQESKLIILASGGPQALLWTTSRVLKVLSVCSVTCAAGILSNLTCNNYKNKMMVCQVGGI--EALVRTVLRAGDREDITEPAICALRHLEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGVATYAAAVLFRMS
3	PPA-I	3zuxA	0.132	0.853	1.214	threading_3	ILSKISSF----IGKTFSLWAALFAAAAFFAFKWAGPYIPWLLGIIMFGMGLTL----KPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLP--------------AEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGS----------------------KTEKLTDALPLVSVAAIVLIIGAVV--GASKGKI----MESGLLIFAVVVLHNGIGYLLGFFAAKWT-GLPYDAQKALTIEVGMQNSGLAAALAAAHFAAVVAVPGALFSVWHNISGSLLATY
4	PROSPECT2	1ee4a	0.115	0.957	1.661	threading_4	----------QELPQMTQQLEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNAQTKVVVDADAVPLFIQLLDSTDYRDYVLQCNAMEPSLIRTATWTLSNLCRGKALPTLAKLIYSMDTLVDACWAISYLSDGPQEAIQAVIELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQA-----VIDANLIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNVTLDALENILKMGEADKEAENADFIEIYEKAYKIIETYF
5	PPA-I	3g61A1	0.094	0.740	1.001	threading_5	---------------------------------------------------------------------------------------VSVLTMFRYAGWLDRLY---MLVGTLAAIIHGVALPLMMLSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENF
6	PROSPECT2	1ejlI	0.122	0.971	1.659	threading_6	GTVNWSVEDNSNNL---ESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNISEQTKAVISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLRNLTWTLSNLCRNKILPTLVRLLHHNDPSCWAISYLTDGPNERIEMVVQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLV------PFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGI-IEPLMNLLSAKTKIIQVILDAISNIFQAAETEKLSIMIEVYKASLNLIEKYF
7	PROSPECT2	3a6pA1	0.052	0.951	1.616	threading_7	IANGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENV---NKYQQVKTDTSANCRVGVAALNTLAGYIDWVSMSH---ITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQT---------ADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGATPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFLLAIIPKYLRASMTTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQ--GEVMRLACRLTSFQMAGEWLKYQF
8	PROSPECT2	1xm9A	0.093	0.931	1.613	threading_8	TCFQDESARSPNQNVQQAAAGALRNLVF--------RSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSKEELIADALPVLADRVI-----IPFSGWCVVDPEVFFNATGCLRNLSSAD--AGRQTMRNYSGLIDSLMAYVQNCVAASR---------CDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTAPQIARLLQSGNSDVVRSGASLLSNMSMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMLAKQYFSSSMLNNIINLCKAAEAARLLLSDMW
9	MUSTER	2fozA	0.089	0.905	0.816	threading_9	MA-----------SLSRFRGCLAGALLGDCV-FYEAHDTVDLTSVLRH--VQSLEPDPEALYYTDDTAMARALVQSLLAK---AFDEVDMAHRF--AQEYKKD-PDRGYGAGVVTVFKKLLNPKCRDVFEPARAQFNGKGAMRVAGISLAYSSQDVQKFARLSAQLTHA---SSLGYNGAILQALAVHLALQGSSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLDQA--SVTREEVVSELGNGIAAFVPTAIYCFLRCMFNSLQRTLIYSISLGGTDTIATMAGAIAGAYYQVP-ESWQQSCEGYEETDILAQSLHRVFQKS-------
10	SPARKS	3bana	0.146	0.592	0.685	threading_10	KQGKPNRDAL--IENYKTSIRNVGA-AGIPVVCFMPAFLKSDLAEEMKAIIENYRQNISEEDLWANLEYFIKAILPTAEEA--GVKMAGLPRIITGQEAVERFLNLYDSEHNGITMCVGSYASDPKNDVLAMTEYALKRNRAWG----FQETASQIDMNAVVKLLVDYDWQGSLGRRIWGYDRALGATYFNGLYEANMRAAGKTPDFGIKAKTV------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.453 to 1cpcB SCOP code=a.1.1.3	TM-score=0.421 to 2r2vA SCOP code=h.1.3.1	TM-score=0.633 to 1wa5B SCOP code=a.118.1.1	TM-score=0.438 to 1cpcB SCOP code=a.1.1.3	TM-score=0.434 to 1lvfA SCOP code=a.47.2.1