Template-based Modeling Results for YRAK_ECOLI

Submitted Primary Sequence

>Length 363
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEEECCEECCEEECHHHEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEECCCEEECCCCEEEEECCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEECCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR
432001000000000000011121010212210000000012110232322202101100122220200010211422200000011122212321001012202010000012132212321111112123232212212122221032222422211121201010101110002010121000001001011212112131220020002010101210302522102010010103202232222322120202010102122424110101010021222332010211123213100000112222112121310101022214120202000012222314312020100010115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR
1	MUSTER	1klfP	0.163	0.760	1.161	threading_1	------------------FACKTANGTAIPIGGGSANVYVN----LAPVVNVGQNLVVDLSTQ----IFCHNDYP----------------ETITDYVTLQ-----RGSAYGGVLSNFSGTVKYSGSS--------YPFPTTSETPRVVYNSRTDKPW------PVALYLTPVSAGGVAIAGSLIAVLILRQTNNYNS---DDFQFVWNIYANNDVVVPTGCDVSARD-VTVTLPDYP-------GSVP-------IPLTVYCAKSQN----LGYYLSGTTADAGNSIFTNT-ASFSPAQGVGVQLTR-NGTIIPANNTVSLGAV-GTSAVSLGLTANYAR-TGGQVTAGNVQSIIGVTFVYQ
2	PROSPECT2	3c7eA	0.085	0.972	1.554	threading_2	AT----------STTIAKHIGNSNPLIDHHLGADPVALTYNGRVDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKWAGASWAPSIAVKKINDSPIGPWTDPIGKPLVTPSTPGMSGVVWLFGGVPGVSNPTQGQWANPKTARVIKLGPDMTSASTIDAPFMFEYSYCINFGGTHPADKPPGEIGYMTSSHAVFNFKNEWYKGYRSPHINKLVHNADGSIQEVAANYAGVTQISNLNPYNRVEAETFAWNGRILTEKSTAPGGPVNNQHVTSIQNGDWIAVGNADFGAGGARSSTLGGKIEVRLDSADGKLVGTLNVPSTGGAQTWREIETVHKVFFVFR
3	SPARKS	3jwne	0.153	0.413	2.407	threading_3	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSTITIRGYVR-DNGCSVAAESNFTVDLMENAAKQFNNIGATTP---VVPFRILL--SPCGNAVSAVKVGFTGVADSHNANLLALE-NTVSAAAGLGIQLLNEQQNQIPLNAPSSWTTLTPGKPNTLNFYARLMAT-QVPVTAGHINATATFTLEYQ
4	PPA-I	2jmrA	0.132	0.416	1.336	threading_4	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MADSTITIRGYVR-DNGCSVAAETNFTVDLMENAAKQFNNIGATTPV-----VPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALE-NTVSAASGLGIQLLNEQQNQIPLNAPLSWTTLTPGKPNTLNFYARLMAT-QVPVTAGHINATATFTLEYQ
5	PROSPECT2	1maeH	0.087	0.950	1.520	threading_5	SSASAAAAAAAAALAAGAADGPTNDEAPGADGRRSYINLPAIIQQWVLDAGSGSILGHVNGGFLPNPV---AAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPALLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQSAAGATNKAPIDALSGGRKADTWRPGGWQQVAYL---------KSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIDQDQSTVELGSGPQVLSVM------NEA
6	HHPRED-l	2w07_B	0.288	0.325	4.082	threading_6	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVYIP-PCTINNGQNIVVDFGNINPEHVDNSR------GEVTKTISISCPY-----GSLWIKVTGNTMGGGQNNVL-----ATNITHFGIALYQGKGTPLTL-------------RSTFTFTSVPFRNGSGILNGGDFRTTASMSMIY-
7	HHPRED-g	3jwn_H	0.142	0.758	3.320	threading_7	------------------------FACKTANGTAIPIGSANVYVNLAPAVNVGQNLV--VDLSTQ--IFCHNDYPETIT-DYVTLQR------GSAYGGVLSSFSGTVKYNGSSY---------------PF-PTTSE----TPRVVYNS--R--TDKPW--PVALYLTPVSS-AGGVAIKAGLIAVLILRQTNNYN---SDDFQFVWNIYANDVVVPTGGCDVS-ARDVTVTLPDYPG--------------SVPIPLTVYCAKS----QNLGYYLSGTTADAGNSIFTNTA-SFSPAQGVGVQLT-RNGTIIPANNTVSLGAVG-TSAVSLGLTANYART-GGQVTAGNVQSIIGVTFVYQ
8	HHPRED-g	2w07_B	0.280	0.325	3.779	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVYIP-PCTINNGQNIVVDFGNINPEHVDNSR------GEVTKTISISCPY-----GSLWIKVTGNTMGGQNNVL------ATNITHFGIALYQGKGTPLTL-------------RSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
9	PROSPECT2	3hr6A	0.075	0.920	1.515	threading_9	HA----------------LMGLPTGGLPKVDGMSFTLYRVNEILYTNGHPTDKVTKVATKKTEGGVAKFDNLTPARSQPFLVAAPQTNPTGDGWLQDVHVYPALSEPVKTAVDPDATQPGFSVTKIPEIASNTKFEGFTVADKLPAELGKPDTNKITVTLGGKPVQTYQVGDRTVLSVQLAGATLQSL------------DQHKDQELVVEFEAPVTKQENGQLDNQAWVLPSNPTAQWDPEESGDAALRGMSSKFGQITIEKTPGADRTATFQLHRCSLVKSDPPISLDGKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVEVIVKLEANESTNVLVEQKVKIDNK-K
10	SP3	3jwne	0.153	0.413	2.567	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSTITIRGYVR-DNGCSVAAETNFTVDLMENAAKQFNNIGATTP---VVPFRILL--SPCGNAVSAVKVGFTGVADSHNANLLALE-NTVSAAAGLGIQLLNEQQNQIPLNAPSSWTTLTPGKPNTLNFYARLMAT-QVPVTAGHINATATFTLEYQ

Predicted Tertiary Structure


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TM-score=0.784 to 1klfP SCOP code=b.2.3.2	TM-score=0.723 to 1klfP SCOP code=b.2.3.2	TM-score=0.477 to 1yifA SCOP code=b.29.1.23	TM-score=0.499 to 2vo8A SCOP code=b.2.2.2	TM-score=0.559 to 1klfP SCOP code=b.2.3.2