Submitted Primary Sequence |
>Length 231 MSKRTFAVILTLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGKSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ 123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901 --------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230 |
Predicted Secondary Structure |
>C-coil;H-helix;E-sheet MSKRTFAVILTLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGKSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ CCHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEECCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHHHCCEEEECCCEEEEEECCCEEEEEEEEEECCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEECC 123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901 --------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230 |
Predicted Solvent Accessibility |
>0-buried to 9-exposed MSKRTFAVILTLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGKSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ 432200000000000000000110000022000002224320001011322321000000022233423120100110020233421001002123423432110000002201244424423221000001010200010231322232024222022232101011222100000001124332223011000122120203222222020000012102132111225 123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901 --------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230 |
Top 10 Templates |
Rank | Method | Template | Identity | Coverage | N-Zscore | Threading Alignment | MSKRTFAVILTLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGKSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ |
1 | MUSTER | 1ze3C | 0.392 | 0.883 | 3.061 | threading_1 | ------------------------GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDANNQLPQDRESLFWMNVKAIPSMDKSKLTE-NTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVL--ENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME |
2 | SPARKS | 1p5ua | 0.299 | 0.883 | 5.338 | threading_2 | --------------------SKEYGVTIGESRIIYPLDAAGVMVSVKNTQD-YPVLIQSRIYDENK---EPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDP-DKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSI--PSHYIPPKSTWAFDLPKGLAGNVSWRIINDQGGLDRLYSKNVT |
3 | PROSPECT2 | 1bf8_ | 0.397 | 0.883 | 3.951 | threading_3 | ------------------------GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDTNNQLPQDRESLFWMNVKAIPSMDKSKL-TENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVL--ENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME |
4 | PPA-I | 1ze3C | 0.397 | 0.883 | 3.086 | threading_4 | ------------------------GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDTNNQLPQDRESLFWMNVKAIPSMDKS-KLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVL--ENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME |
5 | HHPRED-l | 2co7_B | 0.345 | 0.853 | 5.699 | threading_5 | -------------------ATKLFSVKLGATRVIYHAGTAGATLSVSNPQN-YPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPE-------TLDLNLSINACDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPIT-GLEYVPPFADKTLN-----HGDIEWRVITDFGGESHPFHYVL- |
6 | HHPRED-g | 2co7_B | 0.345 | 0.853 | 4.970 | threading_6 | -------------------ATKLFSVKLGATRVIYHAGTAGATLSVSNPQN-YPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPE-------TLDLNLSINACDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPIT-GLEYVPPFADKTLN-----HGDIEWRVITDFGGESHPFHYVL- |
7 | SP3 | 1p5ua | 0.299 | 0.883 | 5.213 | threading_7 | --------------------SKEYGVTIGESRIIYPLDAAGVMVSVKNTQ-DYPVLIQSRIYDENK---EPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDP-DKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSI--PSHYIPPKSTWAFDLPKGLARNVSWRIINDQGGLDRLYSKNVT |
8 | SAM-T99 | 1ze3C | 0.392 | 0.883 | 4.761 | threading_8 | ------------------------GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNQLPQDRESLFWMNVKAIPSMDKSK-LTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLE--NALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME |
9 | MUSTER | 2co6B | 0.332 | 0.900 | 3.046 | threading_9 | ----------------LNSATKLFSVKLGATRVIYHAGTG-ATLSVSNPQ-NYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPENEPGAT--LDLNLSINACDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPIT-GLEYVPPFADKTLNMP-GSHGDIEWRVITDFGGESHPFHYVL- |
10 | SPARKS | 3q48a | 0.342 | 0.810 | 5.281 | threading_10 | --------------------------IAQGTRVVFPASEREVTLRVSNTSGT-PVLAQAWIDDGRQDVQVPFSVTPAVTRVEPNGGAVLRIAYLKAPLPTDRESLFWLNILEVPP------------RFSFRSRFKLFFRPSQLKS-VDSAAGKLQWK-FLEVVQVNNPTPYYVSFASVELIGRVMSVGKGMVAPFSTKEFDWME--AASVRYEVINDYGGRNT-HDRALG |
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