Template-based Modeling Results for YQJI_ECOLI


  Submitted Primary Sequence

>Length 207
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD
553323100313122323110313323231111113121021011210311233222113010100000002222210110020023113121212201000002002432102022232222101003300310231231032013102120112223312302200210120022213323223200320020022002102513
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD
1MUSTER3f8fA0.1700.5411.613threading_1--------------------------------------------------MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDGRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEANKK---SEAIK------------------------------------------
2SPARKS3f8ba0.1780.4882.353threading_2------------------------------------------------------PKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDGRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEAN----------------------------------------------------
3PROSPECT21yg2A0.2060.6811.915threading_3-------------------------------------------------------------SLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTC-----VLEVYSITQAGRSALGEWFDQPDEFSAKLMACSVQSAEPYRLQLAELVEESRKLVAHYQEPAVLDKQQRLERIQWADEVLAELNAMA
4PPA-I3f8fA0.1610.5412.084threading_4--------------------------------------------------MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGGGRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEANKKSEAIK---------------------------------------------
5HHPRED-l1xma_A0.2210.4593.009threading_5---------------------------------------------------------VIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYY--KRRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------
6HHPRED-g1xma_A0.2140.4732.967threading_6-------------------------------------------------------SDVIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYG-KRRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------
7SP33hhha0.2020.4782.047threading_7-----------------------------------------------------KQTELLKGILEGLVLAIIQRKETYGYEITKILNDQ--GFTEIVEGTVYTILLRLEKNQWVIAEKKPEPRKFYRLTSSGEAELADFWQRWTLLSKQVNKKKN-----------------------------------------------------
8SAM-T991xmaB0.2160.4933.600threading_8----------------------------------------------------VISSDVIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGETRRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------
9MUSTER1xmaB0.2160.4931.597threading_9----------------------------------------------------VISSDVIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGEERRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------
10SPARKS1xmaa0.2220.4782.333threading_10-------------------------------------------------------SDVIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYETKRRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.541 to 2p8tA
SCOP code=a.4.5.72
TM-score=0.547 to 2p8tA
SCOP code=a.4.5.72
TM-score=0.569 to 2p8tA
SCOP code=a.4.5.72
TM-score=0.650 to 1yg2A
SCOP code=a.4.5.61
TM-score=0.554 to 1xsxA
SCOP code=a.4.5.49