Template-based Modeling Results for YQJH_ECOLI

Submitted Primary Sequence

>Length 254
MNNTPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNTPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK
CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNTPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK
54333423332323132120101202210200000001032032122412321010001223231211212330221232331101100011242422000000002101000002303200100000020221023310000000130001002200210142223120000010223212221222310201000123320011023131223210000002030022003102423132310201000235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNNTPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK
1	MUSTER	2gpjA	0.290	0.843	2.282	threading_1	--------------PAPRELEVIRSTYITPHL-RITLGGAGLAGFPADQESAYIKLLFPQAGER-------------------PLRTYTIR-QQRDDEIDVDFVLHTDGPASSWAKTAQVGELIQIGGPGLKKLINFEADWFLLAGD-TALPAISVNLAKLPN---NAVGYAVIEVLSEADIQPLVHPEHVELHWVINPERPLVERIAQLPWLAGEPAVWIACEFNS-RALRRHFKQAALPKSHFYTSSYWKIG
2	SPARKS	2gpja	0.285	0.843	3.951	threading_2	--------------PAPRELEVIRSTYITPH-LRITLGGAGLAGFPADQESAYIKLLFPQAG-------------------ERPLRTYTIR-QQRDDEIDVDFVLHTDGPASSWAKTAQVGELIQIGGPGLKKLINFEADWFLLAGD-TALPAISVNLAKLPN---NAVGYAVIEVLSEADIQPLVHPEHVELHWVINEGRPLVERIAQLPWLAGEPAVWIACEFNS-RALRRHFKQAALPKSHFYTSSYWKIG
3	PROSPECT2	2gpjA	0.259	0.850	2.870	threading_3	--------------PAPRELEVIRSTYITPHL-RITLGGAGLAGFPADQESAYIKLLFPQAG-------------------ERPLRTYTIRQQRDDEIDVDFVLHDTDGPASSWAKTAQVGELIQIGGPGLKKLINFEADWFLLAGD-TALPAISVNLAKL---PNNAVGYAVIEVLSEADIQPLVHPEHVELHWVINPERPLVERIAQLPWLAGEPAVWIACEFNSRALRRHFKQAHALPKSHFYTSSYWKIG
4	PPA-I	2gpjA	0.284	0.846	2.985	threading_4	--------------PAPRELEVIRSTYITPHL-RITLGGAGLAGFPADQESAYIKLLFPQAGER-------------------PLRTYTIR-QQRDDEIDVDFVLHTDGPASSWAKTAQVGELIQIGGPGLKKLINFEADWFLLAGD-TALPAISVNLAKLPNNAV---GYAVIEVLSEADIQPLVHPEHVELHWVINPGRPLVERIAQLPWLAGEPAVWIACEFNSRALRRHFKQAHALPKSHFYTSSYWKIG
5	HHPRED-l	2gpj_A	0.291	0.839	3.893	threading_5	--------------PAPRELEVIRSTYITPH-LRITLGGAGLAGFPADQESAYIKLLFPQAGE------------------RPL-RTYTIRQQRDD-EIDVDFVHDTDGPASSWAKTAQVGELIQIGGPGLKKLINFEADWFLLAGD-TALPAISVNLAKLP---NNAVGYAVIEVLSEADIQPLVHPEHVELHWVINEGRPLVERIAQLPWLAGEPAVWIACEFNS-RALRRHFKAHALPKSHFYTSSYWKI-
6	HHPRED-g	2gpj_A	0.300	0.839	6.821	threading_6	--------------PAPRELEVIRSTYITPH-LRITLGGAGLAGFPADQESAYIKLLFPQAG------------------ERPL-RTYTIRQRD--DEIDVDFVLHDTGPASSWAKTAQVGELIQIGGPGLKKLINFEADWFLLAGD-TALPAISVNLAKLPNN---AVGYAVIEVLSEADIQPLVHPEHVELHWVINPGRPLVERIAQLPWLAGEPAVWIACEFNS-RALRRHFKAHALPKSHFYTSSYWKIG
7	SP3	2gpja	0.294	0.843	4.212	threading_7	--------------PAPRELEVIRSTYITPH-LRITLGGAGLAGFPADQESAYIKLLFPQAG-------------------ERPLRTYTIRQ-QRDDEIDVDFVLHTDGPASSWAKTAQVGELIQIGGPGLKKLINFEADWFLLAGD-TALPAISVNLAKLPNNA---VGYAVIEVLSEADIQPLVHPEHVELHWVINPERPLVERIAQLPWLAGEPAVWIACEF-NSRALRRHFKQAALPKSHFYTSSYWKIG
8	SAM-T99	2gpjA	0.305	0.839	4.152	threading_8	--------------PAPRELEVIRSTYITPHL-RITLGGAGLAGFPADQESAYIKLLFPQAG-------------------ERPLRTYTIRQRDD--EIDVDFVLHDTGPASSWAKTAQVGELIQIGGPGLKKLINFEADWFLLAGD-TALPAISVNLAKLPNNAVGY---AVIEVLSEADIQPLVHPEHVELHWVINPGRPLVERIAQLPWLAGEPAVWIACEFNS-RALRRHFKAHALPKSHFYTSSYWKIG
9	MUSTER	2eixA	0.135	0.874	1.639	threading_9	------KREPALNPNEYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDG-------------------KEIYRPYTPVSSDDEGYFDLIIKVYEKGQMSQYIDHLNPGDFLQVRGPKGQFDYKPNVKEMGMIAGGTGITPMLQVARAIIKNPKKTIINLIFANVNEDDILLRTKYSNFKVYYVLNNPPA-ADMIKQHFSPPSDIKVMMCGPPMMNKAMQGHLETLGYTPEQWFIF------
10	SPARKS	1gvha	0.125	0.913	2.672	threading_10	EAEINENASKAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGF-----------------PHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNANVGDVVKLVAPAGDFFMAVADDPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGDVHAFAQSLPRFTAHTWYRQPSEADRALSKLEFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYE-----C

Predicted Tertiary Structure


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TM-score=0.692 to 1qfjA SCOP code=b.43.4.2	TM-score=0.697 to 1qfjA SCOP code=b.43.4.2	TM-score=0.703 to 1qfjA SCOP code=b.43.4.2	TM-score=0.705 to 1qfjA SCOP code=b.43.4.2	TM-score=0.696 to 1qfjA SCOP code=b.43.4.2