Template-based Modeling Results for YQIK_ECOLI

Submitted Primary Sequence

>Length 553
MDDIVNSVPSWMFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIATAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRILAERQIQETEIDREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAEMQAAAIVELAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPAVIEKSVEPMKSIDGIKIIQVDGLNRGGAAGDANTGNVGGGNLAEQALSAALSYRTQAPLIDSLLNEIGVSGGSLAALTSPLTSTTPVEEKAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDDIVNSVPSWMFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIATAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRILAERQIQETEIDREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAEMQAAAIVELAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPAVIEKSVEPMKSIDGIKIIQVDGLNRGGAAGDANTGNVGGGNLAEQALSAALSYRTQAPLIDSLLNEIGVSGGSLAALTSPLTSTTPVEEKAE
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCEEECCCEEEEEEEEEEEEEECCEEEEECCCCCCCCEEECCCCEEEEEEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDDIVNSVPSWMFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIATAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRILAERQIQETEIDREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAEMQAAAIVELAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPAVIEKSVEPMKSIDGIKIIQVDGLNRGGAAGDANTGNVGGGNLAEQALSAALSYRTQAPLIDSLLNEIGVSGGSLAALTSPLTSTTPVEEKAE
4431111012000100000000000000000002202221000111132321011100000000110110112202020322223200023302010100000202222300010021013322223102200222013002110331212201311320131012101311342212010010221332232112132012121213112112232223221221221113222221112212121221111122222021211221121121223332212212121222122121222211212322123222233122322121122132212113122212121212212121111322132122112122122111111122112301211121212221022111101210211222011212112111210211022111121121003001200220021044031020001212231122122111211212102200100011212121021002201021121211222122222243438
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDDIVNSVPSWMFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIATAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRILAERQIQETEIDREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAEMQAAAIVELAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPAVIEKSVEPMKSIDGIKIIQVDGLNRGGAAGDANTGNVGGGNLAEQALSAALSYRTQAPLIDSLLNEIGVSGGSLAALTSPLTSTTPVEEKAE
1	MUSTER	2zuoM	0.150	0.685	1.235	threading_1	KTGKVRAVSTYMLTQLWEKELPSGVEELL--VSYRVPHNAAVQVY-AKRARVVFGPELVTLDPEEQFTVLSLRALCLLLGPDFFTDIETADHARLQLQLAYNWHFELKNRNDPAEAAKL----FSVPDFVGDACKAIASRVRGAVASVTFDDFHKNSARIIRMAVFGFEKARDQAVFPQNGLVVSSVDVQSVEPVD--------------QRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGTIRDLAVAGPEMQVKLLQSLGLKSTLIINLFSTA---------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	2j68A	0.076	0.922	2.483	threading_2	VNQVATDRFIQDLERVAQVRSEMSVCLITIASKNLQQGVFRLLVLGDMGENLLPSTAVLTV-----LRYGPEKKVTIHFNDGKSPQQLDKQAFPDVDYAVVEYPLGLNDTEARNELSLMRASQPCTLGERRYLENYWDQVRESLIDPDDVEELQASENRLRQVFNANLAEYCTVEGQNIYDERVFELSSIQALRRRLKNPQADLDGTGFPKFMDSLNTFLTRERAIAELRQVRTLARLACNHTREAVARRIPLLEQVNELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLNAALQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITEKLTKNILLNYFTVIGIGGIITAVTGILLGPIGFALLGLGRRELVKTAKKELVKHLPQVAHEQSQVVYNAVKECFDSYEREVSKRINDDIVSRKSELDNLVKQKQT--------------------REINRESEFNRLKNLQEDVIAQLQKIEAAYSNL------------------LAYYSHH
3	SPARKS	1wina	0.161	0.259	3.317	threading_3	------------------------------------------------------GSSG------SSGQRISLEIMTLQPRC---EDVETAEGVALTVTGVAQVKIMTEKELLAVACEQFLGK--NVQDIKNVVLQTLEGHLRSILGTLTVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDK-------VDYLSSLGKTQTSGPSSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	MUSTER	2zuoM2	0.145	0.698	1.211	threading_4	KTGKVRAVSTYMLTQLWEKELPSGVEELL-VVSYRVPHNAAVQVY-AKRARVVFGPELVTLDPEEQFTVLSLRALCLLLGPDFFTDIETADHARLQLQLAYNWHFELKNRNDPAEAAKL----FSVPDFVGDACKAIASRVRGAVASVTFDDFHKNSARIIRMAVFGFEKARDQAVFPQNGLVVSSVDVQSVEPVD--------------QRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGTIRDLAVAGPEMQVKLLQSLGLKSTLITDGSSPINLFSTA---------------------------------------------------------------------------------------------------------------------------------------------------
5	PPA-I	1winA	0.161	0.259	1.105	threading_5	------------------------------------------------------------GSSGSSGQRISLEIMTLQPRC---EDVETAEGVALTVTGVAQVKIMTEKELLAVACEQFLGKN--VQDIKNVVLQTLEGHLRSILGTLTVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDK-------VDYLSSLGKTQTSGPSSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-l	1win_A	0.175	0.259	5.064	threading_6	---------------------------------------------GSS-------G--------SSGQRISLEIMTLQPRC---EDVETAEGVALTVTGVAQVKIMTEKELLAVACEQFLGK--NVQDIKNVVLQTLEGHLRSILGTLTVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVY-------DKVDYLSSLGKTQTSGPSSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	PROSPECT2	1b3ua	0.115	0.897	2.461	threading_7	AAADGDDSLYPIAVLIDEVQLRLNSIKKLSTIALALGVERTR---------------SELLPFLTD-------------------------------------TIYDEDEVLLALAEQLGTLVGGPEYVHCLLRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPR--VSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQARVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCERENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLAIREAATSNLKKLVEKFGKEWAHATIIPKVL---AMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGPILDNSTLQSEVKPILEKLTQDQDSLA
8	HHPRED-g	1win_A	0.168	0.259	4.900	threading_8	---------------------------------------------GSS---------------GSSGQRISLEIMTLQPRCE---DVETAEGVALTVTGVAQVKIMTEKELLAVACEQFLGK--NVQDIKNVVLQTLEGHLRSILGTLTVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYD-------KVDYLSSLGKTQTSGPSSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	2x1gF	0.086	0.986	1.120	threading_9	MTADENELAESCLKTMVNIIIPKTAFVLIKMFLDSLSEITKTEWKRENDNDIIVHIYMLFVSSVERHSTL----LSGITSADPELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWQDEVFAHKCWEYIKPLYAHLTRILVRKSEQSDDLECFRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHPTSFQSVAEHRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMYIPPAINLLVRGLNSSMSAQATLGLKELCRDCQLQYADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSLLRPEEIPKYLDIIVSPCFEELQAICQATPAARIRTIFRLNMISTLFSSLNTPVLLVMQRTMPIFKRIAEMWVEEIDVLEAACSAMKHAITNLRSQPMLQDLCLFIVASFQCCAPTLEISKTAIVMFFKPLMQQLLREFIQHSFKLFESTPEQNFSNISDT-METFFGCLTQIIKKIPQVLEDKTLANSIQFLTHFVMQSRNHAHVTEVVLATGLYT--MMCVGYLTPRSQ-VDKFAD
10	SP3	1wina	0.161	0.259	2.752	threading_10	------------------------------------------------------GSSG------SSGQRISLEIMTLQPR---CEDVETAEGVALTVTGVAQVKIMTEKELLAVACEQFLG--KNVQDIKNVVLQTLEGHLRSILGTLTVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDK-------VDYLSSLGKTQTSGPSSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.493 to 3b5nA SCOP code=h.1.15.1	TM-score=0.906 to 2ooeA SCOP code=a.118.8.7	TM-score=0.405 to 2iu5A SCOP code=a.4.1.9	TM-score=0.558 to 1winA SCOP code=d.43.2.1	TM-score=0.497 to 1x79B SCOP code=h.1.27.2