Template-based Modeling Results for YQHC_ECOLI

Submitted Primary Sequence

>Length 318
MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN
CCHHHCCCHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCEEEEEEECEEEEEECCEEEEECCCEEEEECCCCCCEEEEECCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN
533311322022023312313232003100210230133322130203101001022212311001100000002012101023210202211000010201020111123322000000000121022001100313323221221122122113300100220021133222131003100110011001010000011112432222001200210142022302031003203101000010012113100120021000210120133321300100240213111100210141131012201120342345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN
1	MUSTER	3gbgA	0.102	0.799	1.767	threading_1	-------------------------------------------KKSF--TNVYRMSKFDTNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYI---------LGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYN------SIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---
2	SPARKS	3gbga	0.103	0.796	3.316	threading_2	----------------------------------------------KKSFQTNVYRMSKFDTLYINDYKMFWIDSGIAKLIDKLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSY---------ILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKY------NSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---
3	PROSPECT2	3gbgA	0.111	0.796	3.001	threading_3	K----------------------------------------------KSFQTNVYRMSKFDTYIFNDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGNKD---------LLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSI------FITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT---GV
4	PPA-I	3gbgA	0.107	0.796	2.144	threading_4	----------------------------------------------KKSFQTNVYRMSKFDTLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYI---------LGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYN------SIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---
5	HHPRED-l	3gbg_A	0.104	0.789	4.163	threading_5	----------------------------------------------KKSFQTNVYRMSDTYILYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILG----------KDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNS------IFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---
6	HHPRED-g	3gbg_A	0.112	0.789	3.416	threading_6	----------------------------------K------------KSFQTNVYRMSKFDTLYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILG----------KDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSI------FITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---
7	SP3	3gbga	0.102	0.802	3.223	threading_7	-------------------------------------------KKSF-QTNVYRMSKFDTYILYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYI---------LGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYN------SIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---
8	SAM-T99	2k9sA	0.225	0.321	2.770	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNRVREACQYISDHLADNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRA--------
9	MUSTER	2k9sA	0.208	0.333	0.886	threading_9	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE-----
10	SPARKS	2k9sa	0.208	0.333	2.098	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE-----

Predicted Tertiary Structure


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TM-score=0.464 to 1d5yA SCOP code=a.4.1.8	TM-score=0.469 to 1xjaC SCOP code=b.82.4.1	TM-score=0.464 to 1d5yA SCOP code=a.4.1.8	TM-score=0.486 to 1xjaC SCOP code=b.82.4.1	TM-score=0.463 to 1d5yA SCOP code=a.4.1.8