Template-based Modeling Results for YQGA_ECOLI

Submitted Primary Sequence

>Length 235
MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLGIGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPAHESFIQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVISIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLPALLLAMPLSAAWTAWFA
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLGIGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPAHESFIQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVISIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLPALLLAMPLSAAWTAWFA
CCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLGIGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPAHESFIQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVISIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLPALLLAMPLSAAWTAWFA
3210000000000000000000233023301200010000000000011003122100000000000000100201300220022013113324443223200210000000000001000000121022111000020001000000000010110001000100011000000100220012200100000000000000020011320200100000000000000011114
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLGIGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPAHESFIQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVISIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLPALLLAMPLSAAWTAWFA
1	PROSPECT2	2bkuB2	0.085	0.996	1.328	threading_1	NILTVLAAVIDMLMGLFFRLLEKKD-SAFIEDDVFYAISALAASLGLLKALNQVDSPVSITAVGFIADISNSLDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIIMALCVAAQNTKPETLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTQKRQLSL
2	PPA-I	1pw4A2	0.109	0.779	1.058	threading_2	----------------------------------------TAKQIFMQYVLP--NKLLWYIAIANVFVYLLRYGILDWSPTYL---------KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNVDMICMIVIGFLIYGPVMLIGLHALELAPAGFTGLFGYLGGSVAASAIVGYT-VDFFGWDGGFMVMIGGSILAVILLIVVM
3	HHPRED-g	1t5j_A	0.102	0.877	1.160	threading_3	--LVKMRDILGSVFGAVIGDALGNLTKEEIKKLYGFVDSAGKLNKG-EWTDDTEQAICLIKSL-----TKEGIDIKKFANCLIAWKNKNLENNDYSGVDS-SSCGAA--------MRIYPLGIVF---HNNLKKLKEEVIKASK----ITHNNKTAIAIAFFVSSALKDLLDECYNYIKDFNNLDYIYLASMYGAMAGAYYGFKNIWIDGLKNKEV-----IFELAERLYHLATE
4	PROSPECT2	3ibvA1	0.093	0.962	1.263	threading_4	MSAQDVENAVEAA--------LDPSVGPIIKQQATDFIGSLRGWKICHEIFSEKTKYKPSTRLICLQTLSEKVRELLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLDFFASLQGVIAASSQSEFSNFYLKVLLSIGDEIADSLVLKTDVQIQKDNLVKDAIRANDMSDIVSFV-YEMMLAYSNAKNYGTVGLCLQVYAVSWININLIVNEPCMNLLYSFTMTEIVK
5	PROSPECT2	2wocA	0.107	0.996	1.220	threading_5	GP-SVHDRALGAFLGLAVGDALGATVEFMTKGEIAQQDTEMSLALGRSLAAKGTLDVADICEEFALWLKSRPVDVGNTCRRGIRRYMHEGTTTAPYSEGDAGNGAAMRCLPAALATLLEPWVLAQARITHNHPLSDAACLTLGRMVHHLIGGRGMKACREEANRLIVDTMQTVLHYYFVTDTFKSCLIQTALAGMLAGATYGVDDIPSGWLSKLDMKVEREIRRQVDALLALAGL
6	PROSPECT2	1r2fA	0.079	0.915	1.187	threading_6	IVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSI-----FSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYV------SDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDVKAFLCYNANKALMNLGYEALEMADVNPAIL---------AALSP
7	PROSPECT2	1t33A	0.107	0.838	1.162	threading_7	MN--------------------IPTTTTKGEQAKSQLIAAALAQFGTRDIAALAGQNIAAIDLYLACAQWIADFLGEKFRPHAEKAERLFS---QPAPDRDAIRELILLACKNMI-----------MLLTQEDTVNLSKFI---SREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTCDANDTRMILHTHALLGEVLAFRILLRTGWPQFD-EEKAELITVTCHIDLILHGLTQ
8	MUSTER	3ea5B	0.129	0.957	0.730	threading_8	IMDGPDKVQRTYYVHQALPSIL-NLMSLQVKETTAWCIGRIADSVA---SIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNPALVDGLIGAANRARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSV-QSNILTVLAAVIRKSPADMLMGLFFRLLSAFIEDDVFYAISALAASLG----GFEKY-LETFSPYLLKALNQSPVSITAVG
9	SPARKS	1ihua	0.123	0.902	0.722	threading_9	-----------------------MQFLQNIPPYLFGGVGKTSISCATAIRLAEQGKVLLVVGQVFSQTIGNEIDPQAAAQQYRARIVDPIKGVLPDDVVSSINEQLSGACTTEIAAFDEFTGLLDASLLTRFDHIIFDTAPTGHTIRLLPGAWSSFIASCLGPMAGLEKQREQYAYAVEALSDPKARLQKSTLQEVARTHLELAAIGLKNQYLVGVLPKTEAATLAAAIWEREQE
10	PROSPECT2	1oyzA	0.083	0.970	1.160	threading_10	KEYGLYNQCKKLNDDELFRLL--DDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILN-----NALNDKSACVRATAIESTAQRCIYSPKIVEQSQITAFDKSTNVRRATAFAISLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELQIEAIIGLSYRKDKRVLSVLCDELKKNTVYAGELGDKTLLPVLDSAIDKLKRS

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.837 to 3ea5B SCOP code=a.118.1.1	TM-score=0.792 to 1pw4A SCOP code=f.38.1.1	TM-score=0.713 to 1t5jA SCOP code=a.209.1.1	TM-score=0.680 to 1wa5C SCOP code=a.118.1.1	TM-score=0.768 to 1t5jA SCOP code=a.209.1.1