Template-based Modeling Results for YQFA_ECOLI

Submitted Primary Sequence

>Length 219
MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQA
554332243111112000100000000000000000000101233210100000000000000000000011002132011002301100000000001010000002112010000000000000000200123312000000000000000000120023011000000000000000000011033120000000000000000000000100134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQA
1	PROSPECT2	1r2fA	0.065	0.986	1.400	threading_1	ISAINWNKIQDTLSAAEQQLTIRVFTGLTLLDTIQNGAPSLMADAITPEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYV---SDEPLKKKIASVFLYSGFWLPMYFSSRGKLTNTADLIRLIIGYYIGYKYQIALQKLSAIEALDLLMELYDNEIRYTEALYAETGWVNDVKAFLCNANKALMNLGYILAALSP
2	PPA-I	1pw4A2	0.098	0.840	1.037	threading_2	--------------------------------TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVDKSSWAYFLYEYAGIPGTLLCGW---MSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHAKAAGTAAGFTGLFGYLGGSVAASAVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK
3	PROSPECT2	3a0oA3	0.089	0.977	1.327	threading_3	MPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRVLDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACI-----ALQGESDEAGEWLDYTVEFLAGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTLGDLPGLKLGYNVRQFAGVTNFDDLVYRHDYP
4	PROSPECT2	1kgna	0.056	0.982	1.255	threading_4	SNEDPVKAINWNMTPQEQLATMRVFTGLTLLDTIGAISLLPDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYY----NGDDPLKKKVASTLLSGFYLPMYLSSRAKLTNTADIIRLIIGYYIGYKYQQGVKKLSEAYTFDLMYDLYENEIEYTEDIYDDLGWTEDVKFLRYNANKALNNLGYAILSSLS
5	PROSPECT2	3kb9A	0.073	1.000	1.207	threading_5	AVPPSLPRQLHPYWPKLQETTADKVEEYADGLCYTDLMAGYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLHTALDSPGDHLHHEDTLVAGFLPATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEEYLELAHWIWTDLLEPSSGCEYRRAALLSQEFAAWYNDLCSLAGDEVHNLGISLIGKELSGAVRANVGNMRNWFNN
6	PROSPECT2	1h0oa	0.079	0.872	1.201	threading_6	VEDEPLLRENPRRKPDERHFISHVLAFFAASDGIVNENLSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFN----------------------------AIETMPCVKKKADWALRWIGDKEATYGERVVAFAAGIFFSGSFASIFWLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQMKQYIEFVADE
7	MUSTER	2x1gF	0.117	0.977	0.850	threading_7	AQVIHTSVKRVVLRAEIAKRVQLVIHTVERYLKLQM-----RVWDAEAYSNMNRAVKCVGTWIKNICVTITAVLLEVVHKCYWPCIDENELAESCLKTMVNIIIQDCHNYPKTAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERSTLLLSGITPELSILVHRIVQEILHCTDKPGIYPVMALAFWYMLQDEVFAHKCWEYIKPLYAH
8	SPARKS	1t33a	0.134	0.849	0.912	threading_8	MNIPTTTTKGEQAKSQLIAAALAQFGEY--------------GLHATTRDIAALA--GQNI------AAITYYFGS--KEDLYLAC-AQWIADFLGEKFRPHAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPT--SAYQLVHEQVIDPLHTHLTRLVAAYTGC------DANDTRMILHTHALLGEVLAFRLGKETILLR
9	PROSPECT2	1oyzA	0.087	1.000	1.182	threading_9	YQKRKASKEKKLNDDELFRLLDDRISSARVLQDAVRLAIEFCSDKNYIRRDIGAFILGQKKCEDNVFNILNNALNDKSACVRATAIESTAQRCIYSPKIVEQSQITAFDKSTNVRRATAFAISTIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGTLLPVLSAIDKLKRS
10	PPA-I	2eh3A	0.077	0.767	0.908	threading_10	-------------------------GTKERILEVSKELFFEKGYQGTSVEEIVKRAN-------LSKGAFYFHFKSELITEIIERTHKKIISLFEENKEKT-------PEELLEFLEVLYREKKVVYIFLFDLLCSEKFRNIYFEKIEDAKRRFEKFLEKHFPSKAEILSEIILGFLRQLILHYVIKEERE-------LPFLKEKLREGLKLIF-----

Predicted Tertiary Structure


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TM-score=0.895 to 1pw4A SCOP code=f.38.1.1	TM-score=0.709 to 2bq1I SCOP code=a.25.1.2	TM-score=0.829 to 1pw4A SCOP code=f.38.1.1	TM-score=0.585 to 1a38A SCOP code=a.118.7.1	TM-score=0.676 to 1uzrB SCOP code=a.25.1.2