Template-based Modeling Results for YQEC_ECOLI


  Submitted Primary Sequence

>Length 256
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN
CCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN
5532223121002002233310000001101100011002102322320000010312222222200002222011111222310000001333323131012300200032230000001011031220301333111014101000000002002140223101112100301312232202220001002012101330342011000012022231021012002102433020000010334311111126
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN
1MUSTER1w78A10.2120.8120.736threading_1IDLGLERVSLVAARLGKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFAE------IESARGDISLTYFEYGTLSALWLFKQLDVVILEV-G-------------------------------LGGRLDATNIVDA-DVAVVTSIALDHTWLGPDRESIGR-EAGIFR--SEK---PAIVGEPEPSTIADVAQEKGALLQRRGVEWNYSV---TDHDWAFSDAH
2SPARKS2qm7a0.1420.9061.178threading_2AESRRADHAAVRDLIDAGRAIRVGITGGVGKSTTIDALGSLLTAAGHKVAVLA----VDPSSTRT---------RMARLAIDRN--AFIRPSPSSGTLGGVAAKTRETMLLCEGFDVILVETVGV--------GQSETAVADLTDFFLVLPGAGDELQGIKKGIFELADMIA-VNKADDGDGERASAAASEYRAALHILTPPSATWTPPVVLHGKGLDSLWSRIEDHRSKLTATGVHERLHQRLVGSAEVRQATAE
3PROSPECT21jbwa20.1380.9061.302threading_3MLAKTGDHRRILTLLHAQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQAD--FNVTEFEFITALRQRQVDVAVIEVG---------IGGDTDSTNVITPVVSVLTE---VALDHQKLLGHTITAIAKHAGIIKRGIPLVPDAAAVVAAKVATTGSQQDGRISDLEVPLVGDQRNMAIAIQTAKVYAKQT----------EWPLTPQNISH
4PPA-I1np6B0.1760.5981.048threading_4------------------MIPLLAFAAGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPG---KDSYELRKAGAVASQQRWALMTETPDEEE---LDLQFLASRMDTSKLDLILVEGFKHEEIAFRDGAGHRPEELVIDRHVIAVASDVPLNLDVDVEGL--ADFVVEWMQKQN-----------------------------------------------------------------------------
5HHPRED-l2j37_W0.1470.9022.454threading_5LVKLVDPGVKAWTP-TKG--NVIMFVGGSGKTTTCSKLAYYYQRKGWKTCLIC-ADTFRAGA---------FDQLKQNATKARIPFYGSYTEM---DPVIIASEGVEKFK-NENFEIIIVDTSGRHKQEDSLFEEMQVANAIQPDNIVYVMDA-SIGQ----ACEAQAKAFKDKVDVA-SVIVTKLDGHASPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTRDMYEQIMKMGPFSQILG-
6HHPRED-g1rj9_A0.1670.7932.133threading_6LVGMLEPDEATLRKLVEPKGRVVLVVGGVGKTTTIAKLGRYYQNLGKKVMF-------------CAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDSAALAYDAVQAMK-ARGYDLLFV--DTAGRLHTKHNLMEELADPEEPKEVWLVLDAVT-GQNGLEQA----KKFHEAVG------LTGVIVTKLDGTAKGGVLKVP--IKFVGVGEGPDDLQPFD-PEAFVEALLE-----------------------
7SP32qm7a0.1710.9141.216threading_7AESRRDHRAAVRDLIDAGRAIRVGITGGVGKSTTIDALGSLLTAAGHKVAVLA----VDPSSTRT---------RMARLAIDRN--AFIRPSPSSGTLGGVAAKTRETMLLCEGFDVILVETVGV------GQSETAVADLTDFFLVLMLPGAGDELQGIKKGIFELADMIA-VNKADGDGERRASAAASEYRAALHILTPPSATWTPVVTISGLATGEIAGKRREQDVKWMWALVHERLHQRLVGSAEVRQATAE
8SAM-T992og2A20.2280.4961.148threading_8---------KTELQLGFRKPAVIMIVGGGGKTTSLGKLAHRLKNEGTKVLM---------AAGDTFRAAASDQLEIWAERTGCEIVVAEGDKA---KAATVLSKAVKRGK-EEGYDVVLC-------------------------------------------------------DTSGRLHTNYSLMEELIACKKAVGKIVSG----------------------------------------------------
9MUSTER2wooA0.1690.9020.705threading_9------PGT-LENLLEQTSLKWIFVGGKGGKTTTSCSLAIQMSKVRSSVLLISTTKFGKDARKVPAMEIDPNLSIQEMTEQALSGMMQDLAFTIPGIDEALAFAEILKQIKSMEFDCVIFDT---------APTGHTLRFLNFPTVL---KALGKL-GGLSSRFGPMINQMGSIMGQDLFG--KMESMRANISEVNKQFKN-PDLTTFVCVCI--SEFLSLYETERMIQELTSYEIDNIVVNQLLDPNTTCPQCMA
10SPARKS3nxsa0.1550.8831.113threading_10VESTRDHREQAQQLLLDGSAMHVGITGGVGKSTTIEALGMHLIEAGHRVAVLAVDRM-------------------ARLAVHPD--AYIRPSPTSGTLGGVATRETIVLLEAAGYDVILVETVGVGQ--------SEVTVAGMVDTFVFLT-LARTGDQLQGIKKGVLELADVIVKADGEHAVEAKAAARELSGAIRLIYPRESLWRPVLTMSAVEGPELWETVLRHREVLEEAGVRDAVLDRVMNHPEVRRIRVR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.691 to 2gcaA
SCOP code=c.59.1.2
TM-score=0.694 to 2gcaA
SCOP code=c.59.1.2
TM-score=0.700 to 2qm8A
SCOP code=c.37.1.10
TM-score=0.709 to 2gcaA
SCOP code=c.59.1.2
TM-score=0.655 to 1np6B
SCOP code=c.37.1.10