Template-based Modeling Results for YQCE_ECOLI

Submitted Primary Sequence

>Length 425
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
55322121000000000000000100100200010004111021110020000000000000000000012022210000000000000000111110100000000000000000000001001110332210200000100200010000000000002002210211210010000000000000000023343243233333322102201100211100000000000000000000001000201101210000000002100200000000001122324212300000000000000011112232210000000000000000001000000012030212000000000000000010000000010012021120010000000000000000000001202313223222234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
1	MUSTER	1pw4A	0.135	0.958	3.204	threading_1	DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN-----DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYKEVKHFA-LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWM--NPAGNPTVDMICMIVIGFLIYGPVMLIGLHALEL-APKKAAGTAAGFTGLFGYLGSVAASAIVGYTVDFF----GWDGGFMVMIGGSILAVILLIVVMIGEKRR----EQLLQE
2	SPARKS	1pw4a	0.146	0.965	7.930	threading_2	DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPSIAVMFVLLFLCGWFQGM-GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN-----DWHAALYMPAFCAILVALFAFAMMRDTPQSCGIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDSPTYLKEVKHFALDKSSWAYFLYEYA-GIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTV--DMICMIVIGFLIYGPVMLIGLHALEL-APKKAAGTAAGFTGLFGYLGSVAASAIVGYTVDFF----GWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP
3	PROSPECT2	1pw4A	0.150	0.972	2.965	threading_3	FKPATYRRLWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDW-----HAALYMPAFCAILVALFAFAMMRDSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGLDWSPTYLKEVKHFALDKSSWAYFL-YEYAGIPGTLLCGWMSDKVFRGN--RGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALEL-APKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP
4	PPA-I	1pw4A	0.131	0.967	6.753	threading_4	DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND-----WHAALYMPAFCAILVALFAFAMMRDTPQSCGIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYKEVKHFA-LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNP--AGNPTVDMICMIVIGFLIYGPVMLIGLHALEL-APKKAAGTAAGFTGLFGYLGSVAASAIVGYTVDFF----GWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP
5	HHPRED-l	1pw4_A	0.155	0.955	6.398	threading_5	DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPSIAVMFVLLFLCGWFQGMG-WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN-----DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPI---TAKQIFMQYVLPNKLLWYIAIANVFVYLLRGILDWSPTYLKEVKHFALDKSSWA-YFLYEYAGIPGTLLCGWMSDKVFRGNRGATG--VFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALEL-APKKAAGTAAGFTGLFGYLGGVAASAIVGYTVDFFG----WDGGFMVMIGGSILAVILLIVVMGEKRRHEQLLQELVP-
6	HHPRED-g	1pw4_A	0.153	0.955	6.543	threading_6	DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAAVMFVLLFLCGWFQGMG-WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN-----DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPI---TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGLDWSPTYLKEVKHFALDKSSWA-YFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTL--VTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-PKKAAGTAAGFTGLFGYLGGVAASAIVGYTVDFFGWD----GGFMVMIGGSILAVILLIVVMGEKRRHEQLLQELVP-
7	SP3	1pw4a	0.144	0.965	6.830	threading_7	IDPTRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVSSIAVMFVLLFLCGWFQGM-GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN-----DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDSPTYLKEVKHFALDKSSWAYFLYEYA-GIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGN--PTVDMICMIVIGFLIYGPVMLIGLHALEL-APKKAAGTAAGFTGLFGYLGSVAASAIVGYTVDFF----GWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP
8	SAM-T99	1pw4A	0.144	0.951	6.870	threading_8	DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPSIAVMFVLLFLCGWFQGMGW-PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND-----WHAALYMPAFCAILVALFAFAMMRDTPQIEEYKNDTAKQIF---MQYVLPNKLLWYIAIANVFVYLLRYGIDWSPTYLKEVKHFALDKSSWAYFLYEY-AGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNP--AGNPTVDMICMIVIGFLIYGPVMLIGLHALEL-APKKAAGTAAGFTGLFGYGGSVAASAIVGYTVDFFG----WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE---
9	MUSTER	2gfpA	0.098	0.864	1.766	threading_9	----------LLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLY-ERTQLRHANSLLNMGILVSPLLAPLIGGLL------DTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSY-----KTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLGAVLGL-SSMTVSILFILPIPAAFFGAWFAGRPNKRF-----STLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLLATSGAMEPF---PFLAGTAGALVGGLQNIGSGVLASLSAMLPQT--GQGSLGLLMTLMGLLIVL-------------------------
10	SPARKS	2gfpa	0.126	0.875	4.243	threading_10	----------LLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGT-GVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLL------DTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSY-----KTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVL----GLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPF--PFLAGTAGALVGGLQNIGSGVLASLS--------AMLPQTGQGSLGLLMTLMGLLIVLCL-----------------

Predicted Tertiary Structure


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TM-score=0.911 to 1pw4A SCOP code=f.38.1.1	TM-score=0.929 to 1pw4A SCOP code=f.38.1.1	TM-score=0.921 to 1pw4A SCOP code=f.38.1.1	TM-score=0.927 to 1pw4A SCOP code=f.38.1.1	TM-score=0.925 to 1pw4A SCOP code=f.38.1.1