Template-based Modeling Results for YPHE_ECOLI

Submitted Primary Sequence

>Length 503
MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH
CCCCCCCCCEEEEECCEEECCCCEEECCCEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEECCCCHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH
55323322200102100120110100230102012010000001111010000100000123230100022020203312113202411010000101103102000000002213320101122002102400420203011322132011012100200210413020000111111022210210020023014221000000020310230011000011120001020330113200011101302210122334223110010210234341330002012010000000110000000100000233330200021120223101100420000012223321011200022000001022102201032321231022003302030122312121022111110000100211010000110021011201110020021004221000000020330031010000002010012023322212001001325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH
1	MUSTER	3ozxA	0.177	0.901	1.759	threading_1	-----------E-GEVIHRY-KVNGFKLFGLPPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGD---------PNSKVGKDEVLKRGIYNYFKELNELKIVHKIQYVEYASKFLKGTILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLGPAENMKIRPDEIKFMLKTKMKWTKIIGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQIL-------------SYKPQRIFPN---YDGTVQQYLENAS-----KDALSTS---SWFFEEVTKRLNL-HRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTREKAVTFIIDHDLSIHDYIADRIIVFK-GEPAGLATSPVTLKTGMNEFL-RE
2	SPARKS	1yqta	0.219	0.899	5.691	threading_2	------------EEDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNGDNDSWDGVIRAFRGNELQNYFEKLRPVVKPQYVDLIPKAVKGKVIEL---------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYEIERETLVTYPRLVGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDASKLNS---------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLASIGIT
3	PROSPECT2	1yqtA	0.215	0.899	4.177	threading_3	E------------EDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNKLKNGEIRPVVKPQYVDLIPKAVKGKVIEL---------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFSQPKGTRNFLRGYLKDENVRFRPYEIKEIERETLVTYPRLVGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDL--------------TVAYKPQYIK---ADYEGTVYELLSKIDASKLNS---------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLASIGIA
4	PPA-I	3ozxA	0.158	0.891	4.164	threading_4	------------EGEVIHRY-KVNGFKLFGLPTKNNTILGVLGKNGVGKTTVLKILAGEIIPNFG---------DPNSKVGKDEVLKRELKIVHKIQYVEYASKFL-------KGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKENMKIRPDEIKFMLKLKTKMKWTKIIGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKP----------------QRIFPNYDGTVQQYLENASKDALSTS--------SWFFEEVTKRLNL-HRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTREKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGLATSPVTLKTGMNEFLRE
5	HHPRED-l	1yqt_A	0.216	0.883	2.397	threading_5	-----------E-EDCVHRYGVNFVLYRLP-VVKEG-VVGIVGPNGTGKSTAVKILAGQLIPNLCNDSWDGVAFRGNELQNYFEKKNGEIRPVVKPVDLIPKAVKGKVIELLK---------KADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGISQPKGTRNGINEFLRGYENVRFRPGERVEIERETLVTYPRLVGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYI---KADYEGTVYELLSKIDASK---------LNSNFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKEKTALVVEHDVL-IDYVSDRL-VFEPGKYGRALPP---REG-NRFLASI-
6	HHPRED-g	1yqt_A	0.216	0.875	2.213	threading_6	----------------EED--CVHRYGVNAFVLYEG-VVGIVGPNGTGKSTAVKILAGQLIPNLDNDSWDGVIRAFRGNELQEKNGEIRPVVKPQYVDLIPKAVKGKVIELLKK---------ADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGYGIFSQPKGTRNGINEFLRGYLKDENVRGERVEIERETLVTYPRLVKSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDASKL---------NSNFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKEKTALVVEHDVL-IDYVSDRL-VFEPGKYGRALPP---REG-NRFLASIG
7	SP3	1yqta	0.217	0.899	5.971	threading_7	-----------E-EDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCNDSWDGVIRAFRGNELQNYFEKLRPVVKPQYVDLIPKAVKGKVIEL---------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGDENVRFRPYEIKFTKRETLVTYPRLVGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDASKLNS---------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLASIGIT
8	SAM-T99	1g6hA	0.242	0.485	2.509	threading_8	------TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDI---TNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDPKVVEIYIGE
9	MUSTER	3bk7A	0.214	0.920	1.568	threading_9	HKCPFNAISIVNLEDCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVAFNELQNYFERLKNGIRPVVKPVDLLPKAVVRELLKKVDEVGK------------FEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSKPKGTRNGINEFLGRPYEIRFTKLSERVERETLVEYPRLVGSFKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT--------------VAYKPQYIK---AEYEGTVYELLSKIDSSKLNS---------NFYKTELLKPLGII-DLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKEKTALVVEHDVLMIDYVSDRLIVFE-GEPHGRALPPMGMREGMNRFLASV
10	SPARKS	1g6ha	0.251	0.475	3.514	threading_10	------TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITN---KEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEELSDPKVVEIYIGE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.583 to 1sgwA SCOP code=c.37.1.12	TM-score=0.575 to 1sgwA SCOP code=c.37.1.12	TM-score=0.565 to 1sgwA SCOP code=c.37.1.12	TM-score=0.569 to 1sgwA SCOP code=c.37.1.12	TM-score=0.576 to 1sgwA SCOP code=c.37.1.12