Template-based Modeling Results for YPHB_ECOLI

Submitted Primary Sequence

>Length 290
MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL
CCEEEEECCCEEEEEECCCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCEECCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEEEECCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL
34101022220101002210100001133010011033222222110000000011022110102122020231232211100010110202011123210001021421213020100010133202010102122232000000001011022202010202110123332111310332233121221010233201101101312010112442210102013202000000122223423211000010011012231233123010012122020201020133
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL
1	MUSTER	3nreA	0.986	0.990	3.385	threading_1	GTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIE-TTPPAPCYFIFVSDPAFDKGYAFDFFCLEPS-HAPDDHHRPEGGDLIALAPGESTTSES-LRVEWL
2	SPARKS	3nrea	0.979	0.990	5.788	threading_2	GTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIETTP-PAPCYFIFVSDPAFDKGYAFDFFCLEPS-HAPDDHHRPEGGDLIALAPGESTTS-ESLRVEWL
3	PROSPECT2	3nreA	0.986	0.990	3.615	threading_3	GTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIET-TPPAPCYFIFVSDPAFDKGYAFDFFCLEPS-HAPDDHHRPEGGDLIALAPGESTTSE-SLRVEWL
4	PPA-I	3nreA	0.979	0.990	4.118	threading_4	GTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIE-TTPPAPCYFIFVSDPAFDKGYAFDFFCLEPSHA-PDDHHRPEGGDLIALAPGESTTSES-LRVEWL
5	HHPRED-l	3nre_A	0.968	0.976	4.345	threading_5	-TIYTLSHGSLKLDVSDQGGVIEG-FWRDTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAII-ETTPPAPCYFIFVSDPADKGYA-FDFFCLEP-SHAPDDHHRPEGGDLIALAPGESTTSE-SLRVEW-
6	HHPRED-g	1z45_A	0.155	0.976	4.953	threading_6	ARFVTIGAGRFQATFANLGASIVDLKVNGQSVVLGYENYLNDSAYIGATIGRYANRISKGKFSLCNKDYQLTVNNG--VNANHSSSFHKRFLGPIPSKDVAEYMLIDNEFPGDLLVTIQYTVNVAQKSLEIVYKGTAGEATPINLTNHSYFNLNKGTEIMVRSKKSVDVDKNMIPTGNVDREIATFNSTKPTVLGPKQFDCCFVVDENIVKAFHPDSNITLEVLSTE--PTYQFYTGDFLSAGYEARQGFAIEPG-RYIDAINQENWKDCVTLKNGETYGSKIVYRFS--
7	SP3	3nrea	0.979	0.990	5.888	threading_7	GTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIETTP-PAPCYFIFVSDPAFDKGYAFDFFCLEPS-HAPDDHHRPEGGDLIALAPGESTTS-ESLRVEWL
8	SAM-T99	3nreA	0.983	0.990	4.069	threading_8	GTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIETT-PPAPCYFIFVSDPAFDKGYAFDFFCLEPS-HAPDDHHRPEGGDLIALAPGESTTSES-LRVEWL
9	MUSTER	1lurA	0.142	0.972	2.580	threading_9	SGFIEIANQGLTATLLPFGATLAKLTFPDQDLVLGFDTIDEDAASIGKTVGRVANRIKNSTLHFDGKQYTTPNN---GPHYLHGGPNYRKWEVVRHAPESVSFSVRANELPGDAKIDVTYTVNDRN-QLIIEHHATCDTPGLLALTNHAYWNLDGAEHFLEEADEFVEVDDTFCPGAIRSVTDTGFDFRSGKQLKESDLDNDLVITKTYLRFWSEKSGIELSITTSYP--VIHLYASKFLGEHYKANKALAIEPQ-FHSAAPNFDHFPDV-SLRPGDHYCQEIVYTFSHV
10	SPARKS	1z45a	0.152	0.976	5.727	threading_10	ARFVTIGAGRFQATFANLGASIVDLKVNGQSVVLGYENLNPDSAYIGATIGRYANRISKGKFSLCNKDYQLTVNNG--VNANHSSIGRKRFLGPIIQNPTAEYMLIDNEFPGDLLVTIQYTVNVAQLEIVYKGKLTAGEATPINLTNHSYFNLNKGTEIMVRSKKSVDVDKNMIPTNIVDREIATFNSTKPTVLGPKNFDCCFVVDENAVKAFHPDSNITLEVLSTE--PTYQFYTGDFLSAGYEARQGFAIEPG-RYIDAINQENWKDCVTLKNGETYGSKIVYRFS--

Predicted Tertiary Structure


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TM-score=0.818 to 1lurA SCOP code=b.30.5.4	TM-score=0.812 to 1lurA SCOP code=b.30.5.4	TM-score=0.814 to 1lurA SCOP code=b.30.5.4	TM-score=0.819 to 1lurA SCOP code=b.30.5.4	TM-score=0.818 to 1lurA SCOP code=b.30.5.4