Template-based Modeling Results for YPFH_ECOLI

Submitted Primary Sequence

>Length 232
MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM
CCCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM
5533000022244313100000000021120003002100320230000000012111111010001031113312212021002101200210042220223000000002000000000211212000000000211212321132110000002312201021021013002312020101002311120133002200200221012100220121233233220112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM
1	MUSTER	1auoA	0.185	0.884	2.307	threading_1	MT-EPLIL-QPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTINGGYEMPSWYDIKAMSPARSLEELEVSAKMVTDLIEAQKRT--IDASRIFLAGFSQGGAVVFHTAFINQGPLGGVIALSTYAPTFGSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARLG----------------------
2	SPARKS	3u0va	0.160	0.888	3.468	threading_2	---LQRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVDLTFQHIKIIYPTAPTPMKGGISNVWFDRFKITNPEHLESIDVMCQVLTDLIDEEVKS-GIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKAQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKLP----------------------
3	PROSPECT2	3u0vA	0.165	0.888	3.456	threading_3	LQ---RCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNTFQHIKIIYPTAPPRSKGGISNVWFDRFKITNDCPLESIDVMCQVLTDLIDEEV-KSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKAQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKLP----------------------
4	PPA-I	1auoA	0.193	0.892	2.479	threading_4	--MTEPLILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTINGGYEMPSWYDIKAMSPARSILEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINQGPLGGVIALSTYAPLELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARLG----------------------
5	HHPRED-l	1auo_A	0.194	0.888	1.938	threading_5	MTEPL--ILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINMPSWYDIKAMSRSISLEELEVSAKMVTDLIEA-QKRTGIDASRIFLAGFSQGGAVVFHTAFINQGPLGGVIALSTYAPTFLSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARLG----------------------
6	HHPRED-g	1auo_A	0.189	0.888	2.509	threading_6	MT--EPLILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPGGYEMPSWYDIKAMSPSISLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFIWQGPLGGVIALSTYAPTFGDASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARLG----------------------
7	SP3	3u0va	0.165	0.888	3.559	threading_7	---LQRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVDLTFQHIKIIYPTAPTPMKGGISNVWFDRFKITNPEHLESIDVMCQVLTDLIDEEVK-SGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKLP----------------------
8	SAM-T99	3cn7A	0.189	0.845	2.978	threading_8	-----------APNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNMPSWYDILAFSPAIDEDQLNASADQVIALIDEQRAK-GIAAERIILAGFSQGGAVVLHTAFRYAQPLGGVLALSTYAPTFDDLAHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL-----------------------
9	MUSTER	3cn7A	0.182	0.875	2.286	threading_9	--SEPLILDAPN--ADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPTVNGGWVMPSWYDILAFSPARDEDQLNASADQVIALIDEQRAKG-IAAERIILAGFSQGGAVVLHTAFRRAQPLGGVLALSTYAPTFDDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL-----------------------
10	SPARKS	1fj2a	0.191	0.901	3.220	threading_10	MSTPLPAIVPAARKATAAVIFLHGLGDTGHGWAEAFAGI--RSSHIKYICPHAPTLNMNVAMPSWFDIIGLSPDEDESGIKQAAENIKALIDQEVKN-GIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLPPI--------------------

Predicted Tertiary Structure


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TM-score=0.885 to 1auoA SCOP code=c.69.1.14	TM-score=0.896 to 1auoA SCOP code=c.69.1.14	TM-score=0.841 to 1fj2A SCOP code=c.69.1.14	TM-score=0.842 to 1fj2A SCOP code=c.69.1.14	TM-score=0.896 to 1auoA SCOP code=c.69.1.14