Template-based Modeling Results for YOHK_ECOLI

Submitted Primary Sequence

>Length 231
MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG
453121100000000000021001314221010000000000000210102121014003000000100000000100210220112021000000000000000000002102022300010002001010011002202112100000000000000000200020030312001000000001000002003122220000000000000000000000020011015
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG
1	MUSTER	3zuxA	0.129	0.970	0.898	threading_1	KWAGPYIPWLLGIIMFGMGLTL-SDFDILFKHPKVVIIGVIAQFAIM-NLPVMTYLARGTSVSTLTSPLLTPAIFLMLAG-EMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGTDALPLVSVAAIVLIIGAVVGASKGK--SGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGNSGLAAALAAAHFAAAPV-VAVPGALFSVWHNISGSLLATYWAAKA-
2	SPARKS	1zk8a	0.160	0.649	1.087	threading_2	--------------------------------------------------------------------------IGL--TLQKIVETAAEIADAN--G--VQEVTLASLAQTLGVGLQDVRKNLGIYGIKKLHNRLEEAAEDKRD-EAIHALGEAYVAFVRKPGLYEATFLRDEEVRKAGDGIVKLCLQVLQQYGLEGALHATRGFRSICHGFASIELDISLHVLLETFIK
3	PROSPECT2	1oyzA	0.108	0.965	1.287	threading_3	SKEYGLYNQCKSLKRISSARVLQLRGGQDAVRLAIIRRDIGAFILGQIKICKKCEDNVFNILNACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKK--------NTVYDDIIEAAGELGDKTLLPVLDTNEIITSAIDKLK
4	PPA-I	3zuxA	0.111	0.900	1.241	threading_4	------------NILSKISSFIGKTF------SLWAALFAAAAFFAPDTFK-----WAGPYIPWLLGIIMFGMGLTLPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIM
5	HHPRED-l	3zux_A	0.103	0.883	1.019	threading_5	----------------NILSKISSFIGKTFSLWAALFAAA----AFFAPDTFKWA---GPYIPWLLGIIMFGMGLTLKSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVCPGGTASNV---MTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMAMLMSIVKLPIVLGLIVHKVLGSTDALPLVSVAAIALFSVWHNISGSLLATYWAAKA-
6	HHPRED-g	3zux_A	0.117	0.887	1.881	threading_6	--------------------NILSKISSFIGKTFSLWAALFAAAAFFAPDTF-KWAG--PYIPWLLGIIMFGMGLTLKSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGCCPGGTASNV---MTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMEMLMSIVKLPIVLGLIVHKVLGLTDALPLVSVAAIVLGKIMEIFAVVVLHNGIGYLLG
7	SP3	2xwub	0.100	0.996	0.507	threading_7	ALGNPELSVSSVSTLKKICRECKYDL-PPYAANIVAVSQDVLMKQIHKTSQCMWLMQAGFLLVEEILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSASALDLTRQLVHIHEPAHFPPIEALFLLVTSVTLTLFQQGPRPDIVDSFMQLLA
8	SAM-T99	1vpvA	0.149	0.320	0.647	threading_8	-------VLVLTLSSKLSGTYNSAVLAKEVDIPVYVVDTLLASGAIPLPARVARELENGKVITTHVGPGTVGFGIEVLERK------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	1pw4A2	0.130	0.831	0.745	threading_9	-----------------TAKQIFMQY---LPNKLLWYIAIANVFVYL----LRYGIL--DWSPTYL-----------KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHA-LAPKKAAGTAAGFTGLFGYLGGSVAASA-WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQ
10	SPARKS	2nx4a	0.070	0.684	0.980	threading_10	-------------------------------------------------------------------------GVPKLVDHDERRRSITAAAWRLIAARGIEAANMRDIATEAGYGKDEILRTSYEHISEATDRRIAEALGDATGLDALRILCREEEQLLEARIAASLWPMAATNRRTMDNWREQMAIFLEQAREEGDVTIVVEQLLNMMMGMQILGVSERQLEMLEQFVA

Predicted Tertiary Structure


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TM-score=0.427 to 1yozB SCOP code=a.253.1.1	TM-score=0.442 to 1yozB SCOP code=a.253.1.1	TM-score=0.704 to 1zk8A SCOP code=a.4.1.9	TM-score=0.844 to 1oyzA SCOP code=a.118.1.16	TM-score=0.463 to 1pv6A SCOP code=f.38.1.2