Template-based Modeling Results for YOHD_ECOLI

Submitted Primary Sequence

>Length 192
MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA
431210011000000000010201000000000022120200000000000000000000000120013003311323320220130034121100000100100100000000002020100000000000000000000000002001100210220020000000000000001100223233334444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA
1	PROSPECT2	1pw4A2	0.095	0.984	1.144	threading_1	PNKLLWYIAIANVFVYLLRYG---ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMFRGNRGATGVFFMTLVTIATIVYWMNPAGMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP
2	PPA-I	1pw4A2	0.074	0.984	1.159	threading_2	PNKLLWYIAIANVFVYLLRY---GILDWSPTYLKEVKHFASSWAYFLYEYAGIPGTLLCGWMSDKVRGNRGATGVFFMTLVTIATIVYWMNPAGMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP
3	HHPRED-g	2v50_A	0.106	0.839	1.387	threading_3	LVFLVMYLFLQNATLIPTIAVPV-VLLGTFGVLAAFGSINTLTMFGMVLAIGLLVDDAIVVVENVER-VMAEEGLSPREAARKSM------------GQIQGALVGIAMVLSAVFLPMAFFGGFSITIVSAMALSVIVALLCATMLKP---WNLSTHGYERGVASILYVIFWVPLFYV--------------
4	PROSPECT2	1r2fA	0.104	1.000	1.113	threading_4	IPLSNDIPAWQLTIRVFTGLTLLDTIQNIAGAPSLMADAIEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQVSDEPLKKKIASVFLYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDP
5	PROSPECT2	2zcxA	0.091	0.854	1.055	threading_5	ITLTDIAATVGFLKITAEGW---KEWSAELCARLRELPGAAPDAVGQVFAATLAARPLFCDLLAQA--PLNLERNVSVESVRSFKIATLD-------------EVGRIGAELRRLLGVDETQAVDVIATATSLAGALWQMATPGPHIQTLYRSDPRLAHAVVEVEPRLNRVLGALLRGI----------ADG
6	PROSPECT2	1kgna	0.078	1.000	1.045	threading_6	IPVSNDIQSWLATMRVFTGLTLLDTIQGAISLLPDAETMHEEAVYNIAFMESVHAKSYSNIFMTLASTEAFRWSEENENLQRKAKIIMSYYNGDDPLKKKVASTLSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVEEYKAYTFDLMYDLYENEIEYTVKRFLRYNANKALNNPTDETS
7	PROSPECT2	1oyzA	0.058	0.995	1.029	threading_7	LNDDELFRDIGAFILGQIKICKKCEDNVFNILNNALNDKSACVRATAIESTAQRCKKNPIYSPKIV-EQSQITAFDKSTNVRRATAFAISVIATIPLLINLLDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELDDIIEAAGELGDKTLLPVLDTITSAIDKLKRS
8	MUSTER	3zuxA	0.086	0.964	0.726	threading_8	LKPSDFDILFKPKVVIIGVIA---AIMPATAWCLSKLNLPAEIAVGVILVGCCPGGTASNVMTYLARVALSVAV---LTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIV-LIVHKVLKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQ
9	SPARKS	1jt6a	0.097	0.802	0.767	threading_9	SSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAI-IEFYTEYYKTNSINEKMNKLENK------YIDAYHVIFKEGNL--NGEWSINDVNAVSKIAANAVNGIVTF-----THEQNINERIKLMNKFSQIFLNGLS------------------------
10	PROSPECT2	3b2aA	0.114	0.964	1.013	threading_10	NNLRELVLSWQILDAVSLALEDKRALFVALGEILKRADSDLRMMVLERHLDVFINEKVTIKALRALG-YLVKDVPMGSKTFLKAAKTLVSLLESP------DDMMRIETIDVLSKLQPLEDSKLVRTYINELVKVAGFCLFLNMLNSHLTLILDEIPSLLELALDVLEKAIELLKISRIVDGLVYREGAPIS

Predicted Tertiary Structure


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TM-score=0.893 to 1pw4A SCOP code=f.38.1.1	TM-score=0.899 to 1pw4A SCOP code=f.38.1.1	TM-score=0.446 to 1htaA SCOP code=a.22.1.2	TM-score=0.798 to 1uzrB SCOP code=a.25.1.2	TM-score=0.619 to 2hkuA SCOP code=a.4.1.9