Template-based Modeling Results for YOHC_ECOLI

Submitted Primary Sequence

>Length 195
MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHEEECCCCEEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF
442211121102210320253332021000100000000000000000010002113121010022101010111001000000000200110131123322021000000100000000001100110010000000000000000111010012033320000000000000000010100100010111424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF
1	PROSPECT2	1r4wA	0.119	0.949	1.090	threading_1	YQHLWNIPALLAGIMKDSGNQPPAMVPHKGQY--ILKEIPLLKQLFQVPMSVPKDFFGEHVKKGTVNAMRFLTAVSMEQPEMLEKVSRELWMRIWSRDEDITESQNILSAAEKATAQAQHLLNKISTELVKSKLRETTGAACKYGA--FGLPTTAHVDGKTYMLFGSDRMELLAYLLGEKWM------GPVPPTL
2	PPA-I	2vl0A2	0.113	0.544	1.752	threading_2	-----------------------------------------------------------------------NPSYYLWSFILPLGLIIAASWSVFWLESFSERLQTSFTLMLTVVAYAFYTSNILPRMIIAGYGSIFAAILLIIFAHHRGVEDDLLIQRCRL-AFPLGFLAIGCVLVI-----------------
3	PPA-I	2x2vA	0.132	0.349	1.349	threading_3	------------------------------------------------------------------AFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPII---AIVISLLILF----------------------------------------------------------
4	PPA-I	2axtZ	0.190	0.297	1.341	threading_4	--------------------------------------------------------------------------------------------------------------------------------MTILFQLALAALVILSFVMVIGVPVAYASPQDKQLIFLGSGLWIALVLVVGVLNFFVV---------
5	PPA-I	1pw4A2	0.120	0.856	1.240	threading_5	-----------------------TAKQIFMQYVKLLWYIAIANVFVYLLRYGWSPTLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG-----NRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYFFGWDGG
6	PPA-I	1wu0A	0.217	0.354	1.207	threading_6	--------------------------------------------------------------MSLAAAIAVGLGALGAGIGNGLIVSRTIEGIARQPELRPVLQTTMFIGVALVEALPIIGVVFS--FIYLGR--------------------------------------------------------------
7	MUSTER	1pw4A2	0.161	0.826	0.683	threading_7	--------TAKQIFMQYV-----------PNKLLWYIAIANVFVYLLRYGI-WSPT-KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG-------NRGATGVFFMTLVTIATIVYWMNPVDMICMIVIGFLIYGPVMLIGL-HALELA-PKKAGFTFGAASAIVGYTV-IGGSILAVILL---IVVM
8	SPARKS	3mnla	0.111	0.785	0.913	threading_8	VQ------------MRAVADRVGTLYRYFKVHLLVSALGREFSRIDAKTD--RSAVAGA----TPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF--ADASAASEVDQVEKLIDSMFARAMAGEPTEDQYHIARVISDVWLSNLLAWLR-----RASATD---VSKRLDLAVRLLIGDQD--------------
9	PROSPECT2	1k6wa2	0.093	0.995	0.959	threading_9	AGQPNWNQSGTLFEGIERWAERKARAWQTLKWQILKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALREYGVESLHKTFALAQKYDRDEIDDEQSRFVETVAALAHHEGMGATAMHSYNGAYTSRLFRLLKMSNPLVNIHLQGRF-DTYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLGTANM
10	PPA-I	1p49A1	0.304	0.236	1.173	threading_10	--------------------------------------------------------------------------------------------------------FTTGFKRLVFLPLQIVGVTLLVPLGVFFSLLFLAALILTLFLGFLH---------------------------------------------

Predicted Tertiary Structure


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TM-score=0.606 to 1c9bA SCOP code=a.74.1.2	TM-score=0.804 to 1r4wA SCOP code=c.47.1.13	TM-score=0.484 to 1dowA SCOP code=a.24.9.1	TM-score=0.558 to 1izlM SCOP code=i.5.1.1	TM-score=0.474 to 2g38C SCOP code=a.25.4.1