Template-based Modeling Results for YOAE_ECOLI

Submitted Primary Sequence

>Length 518
MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCCCEEEEEEEECCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE
44111002100000000000000000000000000420133223202200000000010000000000020221001003120100000000000000020012014402433332232201000000000000010010010000000001100100000000000011002001201321110000000000000010002000231120001001000100100110022112222112211120000002112234423233102200220243221133121002000201212021010120101002031113201320121310100002232210000010110020023223120220012000003113012001102523110000001110020000021001200120332332321022220000201020210130030331233320100000001001200421210202202010021342201001012333264579
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE
1	MUSTER	3ocmA	0.514	0.282	0.946	threading_1	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFG-VEERNVSGVLTLAERSIRSIT-PRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVR-RNRLRDPIIVHESIGILR-LDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP-----------------------------------------------------------------------------------------
2	SPARKS	3oi8a	0.270	0.293	3.312	threading_2	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRN--VLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLK-YFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE------------------------------------------------------------------------------------------------------
3	PROSPECT2	1jdha	0.076	0.861	1.833	threading_3	TKLLNDEDQVVVNKAAVMVHQLSKKEASAIVRTMQNTNDVETARCTAGTLHNLEGLLAIFKSGGIPALVKMLGS-----PVDSVLFYAITTLHNLVRLAGGLQKMVALLNKTNVK----------FLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGM----QALGLHLTDPSQRLVQNCLWTLRNLSDMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCIEALVRTVLRAGDREDITEPAICALRHLTSR-----------------HQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPR----LVQLLVRAHQDTQFVEGV--------RMEEIVEGCTGALHILARDVHNRIVIRGLNT--------IPLFVQLLY----SPIENIQRVAAGVLCELAQDKEAAEAIEAEG------------ATAPLTELLHSRNEGVS
4	PPA-I	3ocmA	0.514	0.282	1.955	threading_4	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFG-VEERNVSGVLTLAERSIRS-ITPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVR-RNRLRDPIIVHESIGIL-RLDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP-----------------------------------------------------------------------------------------
5	HHPRED-l	3lhh_A	0.364	0.228	2.355	threading_5	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TISSL-VPRSDIVFLDLNLPLDANLRTV-QSPHSRFPVCRNNVDD-VGIISAKQLLSESIAGERLELVDLVKNCNFVPNSLSG-ELLEHFRTTGSQ-VFVVDEYGDLKGLVTLQD--DALTGEFF-----------------------------------------------------------------------------------------------
6	HHPRED-g	3ocm_A	0.534	0.282	2.161	threading_6	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFGVEERN-VSGVLTLAERSIRSI-TPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVRRNR-LRDPIIVHESIGILRL-DTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP-----------------------------------------------------------------------------------------
7	SP3	3ocma	0.507	0.282	2.872	threading_7	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFG-VEERNVSGVLTLAERSIRSIT-PRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-RVRRNRLRDPIIVHESIGIL-RLDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP-----------------------------------------------------------------------------------------
8	SAM-T99	3ocmA	0.514	0.270	3.938	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EERNVSGVLTLAERSIRSI-TPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-RVRRNRLRDPIIVHESIGILR-LDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDE-------------------------------------------------------------------------------------------
9	MUSTER	3oi8A	0.270	0.293	0.860	threading_9	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNV--LKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLK-YFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE------------------------------------------------------------------------------------------------------
10	SPARKS	3ocma	0.514	0.282	3.297	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFG-VEERNVSGVLTLAERSIRSIT-PRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVR-RNRLRDPIIVHESIGILR-LDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP-----------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.456 to 2yzqA SCOP code=d.37.1.1	TM-score=0.454 to 2yzqA SCOP code=d.37.1.1	TM-score=0.496 to 2rc3C SCOP code=d.37.1.1	TM-score=0.683 to 1ialA SCOP code=a.118.1.1	TM-score=0.449 to 2yzqA SCOP code=d.37.1.1