Template-based Modeling Results for YNJF_ECOLI

Submitted Primary Sequence

>Length 206
MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ
33232013102200220030013120012000000000000000000001000000000001001001010022332131100000001000100000000000021001000000000000000000000001333133222223111111001301100000000000010000000000000000001001101111322355
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ
1	SPARKS	2hyja	0.089	0.874	1.018	threading_1	---AEAQATRGRILGRAAEIASEEGITIGRLAELEMSKSGVHKHFGTKETLQISTLDKAFVDFWHRV---VEPALAEPPGLRRLRAVCANSVGYLLLTAALSEYDGRPGRVRDAVAEVWSRWREQLRADLTAAVDKGELPAGFD-------------VEQALFEIVAAGLALNAAMQLQ-----HDRTAADRARRAIERALAQS--
2	PROSPECT2	1t33A	0.083	1.000	1.221	threading_2	MTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTEKAELIYQTVTCHIDLILHGLTQ
3	HHPRED-g	1x3k_A	0.099	0.345	1.135	threading_3	NVGN--DKGFQKVIADMSGPHVARPITHGSYNDLRGVIY--DSMHSTHGAAWNKMMDNFFYVFYECLDGRCSQFS-----------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	2bkuB2	0.148	0.951	1.101	threading_4	QLTLEDAQSLQELQSNILTVLAAKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDADISNSSNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVALDYQIKVLEAVLDAYVGIVAGLHDKPEA----------LFPYVGTIFQFIAQVAEDATSRAAVGLIGDIAAMATKDTARWAREQQKRQLSL
5	PROSPECT2	2fbqA	0.103	0.893	1.096	threading_5	A----QSETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHKALIQAVFSRFLGPFCASLEKELDRRAQHATLEDLLHLLVSQAMALSIFMRLLGLAFSQSQGHLRKYLEEVYGKVFRRYMLLVNEA----------------APKLPPIELFWRVHFMLGAAAFSMSGIKALRAMASTEQVMHLMVPFF--AAGMRID
6	PROSPECT2	3a0oA3	0.069	0.990	1.093	threading_6	WLNSEQHCGWAEFYEKSVEPWLERPVMPDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAAWDTKWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARISLSAVLTPACIALEAGEWLDYTVEFLATLYSPWAGTDGG--WAEGPHYWMTGMAYLIEAANLIRSYLKLGYNVRQFAGVTGNGHYQWYFDHIKADATG
7	PROSPECT2	1t56A	0.097	0.903	1.089	threading_7	GDDRE-----LAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYEAVLLTLLDRVVNQADMALQTLAENPADTDRWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLP-------------AHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIW--VTSIYGE
8	MUSTER	1qgkA	0.100	0.976	0.758	threading_8	IDPEQLQDKSNEILTAIIQGMR-KEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFY----AKGALQYLVPILTQTLTNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKN
9	SPARKS	3mnla	0.099	0.830	0.965	threading_9	LGSEAQRERRKRILDATMAIASKGGVQMRAVADADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTD--RSAVAGAT--------PFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAMAGEPT-------------------------EDQYHIARVISDVWLSNLLAWLTRRASATDVSKR
10	PROSPECT2	2db0A	0.083	0.990	1.081	threading_10	DIREALEKILIMAKESVLKKLIELLDDDLW-TVVKNAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQEIAKA-FGQMAKEKPELVKSMIPVLFANYRIGDEKTKINVSYALEEIAKALMASIVRDFMSMLSSKNREDKLTALNFIEAMGENSFKYVNPFLPRIIEIVRASAVEALVHLALRKVVIKRLTVKEGISRLLLL

Predicted Tertiary Structure


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TM-score=0.946 to 1t33A SCOP code=a.4.1.9	TM-score=0.801 to 2hyjA SCOP code=a.4.1.9	TM-score=0.935 to 1t33A SCOP code=a.4.1.9	TM-score=0.394 to 2d8eA SCOP code=a.130.1.1	TM-score=0.592 to 3ea5B SCOP code=a.118.1.1