Template-based Modeling Results for YNIC_ECOLI


  Submitted Primary Sequence

>Length 222
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLADVKLSSLTELTAKDLLG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLADVKLSSLTELTAKDLLG
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHCCEEEEHHHCCCCCCCCHHHHHHHHHCCCCHHHEEEEECCHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCEEECCHHHCCHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLADVKLSSLTELTAKDLLG
553343010000001000000120002002200330203013311012011120310020012323232322220022012201100332221130032002103522020000001213102200320302300100000330421312020001003302031200000110220010031040100000123133212122010101002201132025
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLADVKLSSLTELTAKDLLG
1MUSTER1te2A0.9000.9502.755threading_1----RQILAAIFD-DGLLIDSEPLWDRAELDVA-SLGVDISRRNELPDTLGLRID-VVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLH--LEKVLTFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGIASKAARRSIVVPAPE--AQNDPRFVLANVKLSSLTELTAKDLLG
2SPARKS3quqa0.2270.9913.250threading_2-HMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYM-HEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILFNSPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLAGADLLFPSMQTLSWDTIML
3PROSPECT23quqA0.2270.9913.667threading_3-HMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAY-MHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILFNSPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLDAGADLLFPSMQTLCWDTIML
4PPA-I3e58A0.2600.9373.129threading_4------VEAIIFD-DGVLFDTEKYYYDRRASFLGQKGISIDHLPP-SFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGD---QSAAKGLLDSLTDVL--DLI-
5HHPRED-l1te2_A0.9950.9462.531threading_5----RQILAAIFD-DGLLIDSEPLWDRAELDV-ASLGVDISRRNELPDTLGLRID-VVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLH-LEKVLT-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNG-IASKAAR-RSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLL-
6HHPRED-g1te2_A0.9950.9502.084threading_6----RQILAAIFD-DGLLIDSEPLWDRAELDV-ASLGVDISRRNELPDTLGLRID-VVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLH-LEKVLT-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNG-IASKAAR-RSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLLG
7SP33l5ka0.2260.9773.279threading_7MAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYS-WDVKSLVMGKKALEAAQIIIDVLQLPMS-KEELVEESQTKLKEVFPT-AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHEFFSLFSHIVLGDEVQHGKPDPDIFLACAKRFSPPMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLS-RDLTTKATLVLNSLQDFQPE-LFG
8SAM-T993l5kA0.2240.9463.102threading_8-----PVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSL-VMGKKALEAAQIIIDVLQLPMS--KEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHEFFSLFSHIVLGDDVQHGKPDPDIFLACAKRFSPPPEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRD-LTTKATLVLNSLQDFQPEL---
9MUSTER3e58A0.2610.9322.678threading_9------VEAIIFD-DGVLFDTEKYYYDRRASFLGQKGISIDHLPP-SFFIGGNTKQVWENILRDEYDKWD-VSTLQEEYNTYKQNNLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGD---QSAAKGLLDSLTDVL--DLI-
10SPARKS3qu2a0.2310.9733.164threading_10-----KLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYM-HEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILFNSPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLAGADLLFPSMQTLSWDTIML

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.972 to 1te2A
TM-score=0.997 to native
SCOP code=c.108.1.6		 TM-score=0.971 to 1te2A
TM-score=0.995 to native
SCOP code=c.108.1.6		 TM-score=0.781 to 2ah5A
TM-score=0.797 to native
SCOP code=c.108.1.6		 TM-score=0.786 to 2fdrA
TM-score=0.791 to native
SCOP code=c.108.1.6		 TM-score=0.819 to 1te2A
TM-score=0.839 to native
SCOP code=c.108.1.6

  Experimental Structure

Download 1te2A
SCOP code=c.108.1.6