Template-based Modeling Results for YNIA_ECOLI

Submitted Primary Sequence

>Length 286
MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA
CHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA
3131013101320231302111203201111000021232200010132321200111010011013032120020000022431000001002222222200110021003113113323110212111120122222232001000111101102102332221120010022014202223120000000001000001330000001000100210000000111311220020023102222202200100100000000110003001102200130135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA
1	MUSTER	3jr1A	0.401	0.993	3.035	threading_1	FWKSISQVLAEQFGAYFIKHKEKLYSG-ENEIWLINDEVQTVFVKINERSY-RSFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDKIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYQSYVSLTQKLINQILHK
2	SPARKS	3jr1a	0.401	0.993	5.560	threading_2	GWKSISQVLAEQFGYYFIKHKEKLYSG-ENEIWLINDEVQTVFVKINERSYR-SFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDKIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNSYVSLTQKLINQILHK
3	PROSPECT2	3jr1A	0.393	0.997	4.258	threading_3	NWKSISQVLAEQFGAYYFIKHKEKLYSGENEIWLINDEVQTVFVKINERS-YRSFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDKIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYQSYVSLTQKLINQILHK
4	PPA-I	3jr1A	0.393	0.997	3.602	threading_4	GWKSISQVLAEQFGAYYFIKHKEKLYSGENEIWLINDEVQTVFVKINERSYR-SFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDKIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYQSYVSLTQKLINQILHK
5	HHPRED-l	3jr1_A	0.409	0.983	3.969	threading_5	-WKSISQVLAEQFGAYFIKHKEKLYSGE-NEIWLINDEVQTVFVKINERSYRS-FRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCI-QVDDIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNSYVSLTQKLINQILH-
6	HHPRED-g	3jr1_A	0.408	0.986	5.135	threading_6	-WKSISQVLAEQFGYYFIKHKEKLYSGE-NEIWLINDEVQTVFVKINERSYRS-FRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCI-QVDDIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNSYVSLTQKLINQILHK
7	SP3	3jr1a	0.401	0.993	5.380	threading_7	GWKSISQVLAEQFGYYFIKHKEKLYSG-ENEIWLINDEVQTVFVKINERSYR-SFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDKIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNSYVSLTQKLINQILHK
8	SAM-T99	3jr1A	0.406	0.990	4.485	threading_8	-WKSISQVLAEQFGYYFIKHKEKLYSGE-NEIWLINDEVQTVFVKINERSYR-SFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDKIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNSYVSLTQKLINQILHK
9	MUSTER	3f7wA	0.293	0.965	2.810	threading_9	V-NSVAARVTELTGR-EVAAVAERGHSHRWHLYRVELADGTLFVKALPDALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD-----RTLAEWVDERPPTPEAAERFGHQLAAHLAGA--ESFGATWDGYIGPLPD-NTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLDALDGDPEPPARIHGDLWNGNVLWQDDGAVVIDPAAHGGHREADLALALFGLPYLDRVRDAYNEVAPLAEGWRARIPLHQLHPLLVHVCLFGAAYRTTLVDTARAALRA
10	SPARKS	3f7wa	0.289	0.969	5.005	threading_10	GVNSVAARVTELTGR-EVAAVAERGHSHRWHLYRVELDGTPLFVKALPDDADGLFRAEALGLDWLGRSFGSPVPQVAGWDD-----RTLAEWVDERPPTPEAAERFGHQLAAHLA--GAESFGATWDGYIGPLPD-NTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLDALDGDPEPPARIHGDLWNGNVLWQDDGAVVIDPAAHGGHREADLALALFGLPYLDRVRDAYNEVAPLAEGWRARIPLHQLHPLLVHVCLFGAAYRTTLVDTARAALRA

Predicted Tertiary Structure


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TM-score=0.676 to 1zylA SCOP code=d.144.1.6	TM-score=0.677 to 1zylA SCOP code=d.144.1.6	TM-score=0.675 to 1zylA SCOP code=d.144.1.6	TM-score=0.677 to 1zylA SCOP code=d.144.1.6	TM-score=0.676 to 1zylA SCOP code=d.144.1.6