Template-based Modeling Results for YNEJ_ECOLI

Submitted Primary Sequence

>Length 293
MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAVRIPATLAEFNRRYPKIQFSLSTGPSGTMLDGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQGYAPVTRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVIAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLEAFIQLLDVPDSARQGYQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAVRIPATLAEFNRRYPKIQFSLSTGPSGTMLDGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQGYAPVTRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVIAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLEAFIQLLDVPDSARQGYQ
CCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCEEEEECCCCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAVRIPATLAEFNRRYPKIQFSLSTGPSGTMLDGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQGYAPVTRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVIAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLEAFIQLLDVPDSARQGYQ
43121011010003201011002302211021111024003211120021222202003002100310230021022012112223320100000020000110020012014401401010021112100200231300000010224331010000121300000142011122022032120000223000121011003322021100010220200100020100000002001322222320000202442220100000132231300200020021122134325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAVRIPATLAEFNRRYPKIQFSLSTGPSGTMLDGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQGYAPVTRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVIAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLEAFIQLLDVPDSARQGYQ
1	MUSTER	1iz1B	0.217	0.976	3.279	threading_1	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFKLADLRAVELTLFPRRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAI--RWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSAKD-----
2	SPARKS	1iz1a	0.218	0.969	5.281	threading_2	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFKLADLRAVELTLFPRGPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVA--AIRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSA-------
3	PROSPECT2	1iz1a	0.218	0.969	4.711	threading_3	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFKLADLRAVELTLFPRRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRS-------A
4	PPA-I	1iz1B	0.217	0.976	5.738	threading_4	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFKLADLRAVELTLFPRRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAI--RWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSAKD-----
5	HHPRED-l	1ixc_A	0.221	0.942	3.351	threading_5	-EFRQLKYFIAVAEAGN-AAAAKRLHVSQPPITRQ-QALEADLGVVLLE-----IELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTH-TKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFKLADLRAVELTLFPRGPSFADEVIGLFKHAGIEPRIARVVEDATAALALT-AGAASSIVPASVAAIR--WPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRS--AKD---
6	HHPRED-g	1ixc_A	0.217	0.942	2.984	threading_6	-EFRQLKYFIAVAEAGN-AAAAKRLHVSQPPITRQ-QALEADLGVVLLE-----IELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTH-TKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFKLADLRAVELTLFPRRPSFADEVIGLFKHAGIEPRIARVVEDATAALALT-AGAASSIVPASVAA--IRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSAKD-----
7	SP3	1iz1a	0.218	0.969	5.536	threading_7	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFKLADLRAVELTLFPRRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVA--AIRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSA-------
8	SAM-T99	1iz1B	0.218	0.973	3.732	threading_8	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAARDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGLADLRAVELTLFPRGPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASV--AAIRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSAK------
9	MUSTER	3fxrA	0.199	0.980	2.899	threading_9	LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDTDLEAQPLYVSDVVIVGQRQHPMATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDLPTPAAAGLIRWIQHHAL------
10	SPARKS	3fxra	0.199	0.980	4.841	threading_10	LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDTDLEAQPLYVSDVVIVGQRQHPMATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDLPTPAAAGLIRWIQHHAL------

Predicted Tertiary Structure


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TM-score=0.845 to 1iz1B SCOP code=a.4.5.37	TM-score=0.849 to 1iz1B SCOP code=a.4.5.37	TM-score=0.807 to 1iz1B SCOP code=a.4.5.37	TM-score=0.800 to 1iz1B SCOP code=a.4.5.37	TM-score=0.845 to 1iz1B SCOP code=a.4.5.37