Template-based Modeling Results for YNCG_ECOLI

Submitted Primary Sequence

>Length 205
MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGASRELLKTLNPLCQVPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQLFQRLLVWLVANVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDCYLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGASRELLKTLNPLCQVPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQLFQRLLVWLVANVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDCYLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII
CEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEECCCCEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGASRELLKTLNPLCQVPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQLFQRLLVWLVANVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDCYLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII
2020000212000000000220402010020102343222331023001202000011243200010000010003212310132222200101100010001011000001002211332232023201310210020012103312000122000000000000000210311133011000002002411201211442424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGASRELLKTLNPLCQVPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQLFQRLLVWLVANVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDCYLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII
1	MUSTER	3uapA	0.240	0.976	3.186	threading_1	VMKLYYFPGACSLAPHIVLREAGLDFELENVDLGTKKTGSGADFLQVNPKGYVPALQLDDGQVLTEDQVILQYLADLKPELMPPSGTFERYRLLEWLAFISTEIHKTFGP-----FWNPESPEASKQIALGLLSRRLDYVEDRLEGGPWLMGDRYSVADAYLSTVLGWCEYLKIDLSKWPRILAYLERNQARPAVQAAMKAEGLI
2	SPARKS	2x64a	0.199	0.980	3.586	threading_2	HMKLYIMPGACSLADHILLRWSGSSFDLQFLDH--QSMKA-PEYLALNPSGAVPALQV-GDWVLTQNAAILNYITDIAPALSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI
3	PROSPECT2	3uapA	0.235	0.976	3.535	threading_3	VMKLYYFPGACSLAPHIVLREAGLDFELENVDLGTKKTGSGADFLQVNPKGYVPALQLDDGQVLTEDQVILQYLADLKPGLMPPSGTFERYRLLEWLAFISTEIHKTFGPFW-----NPESPEASKQIALGLLSRRLDYVEDRLAGGPWLMGDRYSVADAYLSTVLGWCEYLKIDLSKWPRILAYLERNQARPAVQAAMKAEGLI
4	PPA-I	1pmtA	0.251	0.971	2.968	threading_4	-MKLYYTPGSCSLSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAINPKGQVPVLQLDNGDILTEGVAIVQYLADLKPDLIAPPKALERYHQIEWLNFLASEVHKGYSP-----LFSSDTPESYLPVVKNKLKSKFVYINDVLSKQKCVCGDHFTVADAYLFTLSQWAPHVALDLTDLSHLQDYLARIAQRPNVHSALVTEGLI
5	HHPRED-l	1f2e_A	0.237	0.966	1.935	threading_5	-MKLFISPGACSLAPHIALRETGADFEAVKVDLAVRKTEAGEDFLTVNPSGKVPALTLDSGETLTENPAILLYIADQNPASGLAEGSLDRYRLLSRLSFLGSEFHKAFVPL-----FAPATSDEAKAAAAESVKNHLAALDKELAGRDHYAGNAFSVADIYLYVMLGWPAYVGIDMAAYPALGAYAGKIAQRPAVGAALKAEGL-
6	HHPRED-g	3c8e_A	0.167	0.990	1.971	threading_6	PLQLYSLGTPNGQKVTIMLEELGAEYDAWLIRIGDGDQFSSG-FVEVNPNSKIPALRDHTPIRVFESGSILLYLAEKFGYFLPQ-DLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGGLDAGSYKHVQRWAKEVGERPAVKRGRIVNGPL
7	SP3	2x64a	0.194	0.980	3.613	threading_7	HMKLYIMPGACSLADHILLRWSGSSFDLQFLDH--QSMKA-PEYLALNPSGAVPALQVGDW-VLTQNAAILNYITDIAPALSGDGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDMIARSQDNARQKLRVLYQRADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADPGVQAALQAEGLI
8	SAM-T99	3uapA	0.240	0.976	2.683	threading_8	VMKLYYFPGACSLAPHIVLREAGLDFELENVDLGTKKTGSGADFLQVNPKGYVPALQLDDGQVLTEDQVILQYLADLKPELMPPSGTFERYRLLEWLAFISTEIHKTFGPFWNP-----ESPEASKQIALGLLSRRLDYVEDRLEAGPWLMGDRYSVADAYLSTVLGWCEYLKIDLSKWPRILAYLERNQARPAVQAAMKAEGLI
9	MUSTER	1pmtA	0.251	0.971	3.171	threading_9	-MKLYYTPGSCSLSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAINPKGQVPVLQLDNGDILTEGVAIVQYLADLKPDLIAPPKALERYHQIEWLNFLASEVHKGYSP-----LFSSDTPESYLPVVKNKLKSKFVYINDVLSKQKCVCGDHFTVADAYLFTLSQWAPHVALDLTDLSHLQDYLARIAQRPNVHSALVTEGLI
10	SPARKS	3gx0a	0.172	0.966	3.437	threading_10	MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRP-EFLRISPNNKIPAIVDHSPASLFESGAILLYLAEKTGLFLSH-ETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALL-----

Predicted Tertiary Structure


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TM-score=0.948 to 1pmtA SCOP code=a.45.1.1	TM-score=0.974 to 1pmtA SCOP code=a.45.1.1	TM-score=0.907 to 1pmtA SCOP code=a.45.1.1	TM-score=0.944 to 1pmtA SCOP code=a.45.1.1	TM-score=0.976 to 1pmtA SCOP code=a.45.1.1