Template-based Modeling Results for YNCE_ECOLI

Submitted Primary Sequence

>Length 353
MHLRHLFSSRLRGSLLLGSLLVVSSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHLRHLFSSRLRGSLLLGSLLVVSSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MHLRHLFSSRLRGSLLLGSLLVVSSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
54323121141200000000000000113122200211114012100013332000001132442342000010112222011102132211000003222100001223110000104212110202123332221012122100001222110000011432001001023121221022214101000012302100001231200011123231002121233143201000011223210000124212000011421210010212211000002232100000142120000004222102102132101000002302000000134120100014323201012
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MHLRHLFSSRLRGSLLLGSLLVVSSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
1	MUSTER	3vgzA	0.959	0.901	2.403	threading_1	-------------------------------ELRKAVGKG---AYEAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-TGKSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
2	SPARKS	3vgza	0.987	0.901	3.351	threading_2	---------------------------------ELRKAVGKGAYE-AYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-TGKSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
3	PROSPECT2	3vgzA	0.978	0.901	3.886	threading_3	EL---------------------------------RKAVGKGAYE-AYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI-QNTGKSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
4	PPA-I	3vgzA	0.984	0.901	2.366	threading_4	---------------------------------ELRKAVGKGAY-EAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-TGKSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
5	HHPRED-l	3vgz_A	1.000	0.895	2.182	threading_5	----------------------------------LRKAVGKGAYE-AYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-STGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIA-
6	HHPRED-g	1nr0_A	0.104	0.977	1.419	threading_6	HQTTVATSPSGYYCASGDVHGNVRIWDTTQTTHKTTIPVFSPVKDISWDSESKRIAAVGEGR-----ERFGHVFLFDTGTSNGNLTGQRAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTFVHSVRYNPDGSLFASTGGSPDGTKIASASADKTIKIWNVATLKVEKTIPVHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHVPISYNSSCVALSNDKQFV-AVGGQDSKVHVYKLSGASVSEVKIVHEITSVAFSNNGAFL-VATDQSRKVIPYSVANNFELNSWTFHAKVACVSWSPDNVRL-ATGSLDNSVIVWNMNKPSDHPIII
7	SP3	3vgza	0.987	0.901	3.292	threading_7	---------------------------------ELRKAVGKGAYE-AYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-TGKSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
8	SAM-T99	1l0qA	0.217	0.782	3.890	threading_8	---------------------------------------------------STFAYIAN------SESDNISVIDVTSNKVTATIPVG-SNPGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG----------SSPQGVAVSPDGKQVYVTNA--SSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVVINTVTKAVINTVSV---GRSPKGIAVTPD--GTKVYVAN-FDSSISVIDTVTNSVIDTVKVEAPSGIAVNPEGTKAYVTNVDYFNTVSIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVAVGKNPYASGQFIGSIPVQPVYP
9	MUSTER	2h9lA	0.113	0.878	1.867	threading_9	-------SGRENLYFQGTQS---KPTPVKPNALKFTLAGHTKASSVKFSPNGEWLASSSAD-------KLIKIWGAYDGKFEKTISHKLGISDVAWSSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLKGHSNYFCCNFNPQSN------------LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI---DDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSKGKCLKTYTGHKNYCIFANTGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVISTACHPTENIIASAALEDKTIKLWKSDC--------
10	SPARKS	3ow8a	0.154	0.807	2.987	threading_10	-----------------------------YGILFKQEQHDDAIWSVAW---GETVVTGSLD-------DLVKVWKWRDERLQWSLEGQLGVVSVDISHTLPIAASS-SLDAHIRLWDLENGKQIKSIDAGPVDWTLAFSPDSQ------------YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL----EGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAGTLSGHASWNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQWGVKYNGNGS-KIVSVGDDQEIHIYDCP---------

Predicted Tertiary Structure


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TM-score=0.799 to 1vyhT SCOP code=b.69.4.1	TM-score=0.774 to 1vyhT SCOP code=b.69.4.1	TM-score=0.796 to 1vyhT SCOP code=b.69.4.1	TM-score=0.797 to 1vyhT SCOP code=b.69.4.1	TM-score=0.798 to 1vyhT SCOP code=b.69.4.1