Template-based Modeling Results for YNBA_ECOLI


  Submitted Primary Sequence

>Length 201
MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLAAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAEI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLAAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAEI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLAAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAEI
451220220022002100210142301111000000000000000000012100000000000010001000010013133313000001200100010000000000010000000000000000200000021030221220111201100000000000000110010000000000000000002102210121245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLAAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAEI
1SPARKS3mnla0.0970.9201.197threading_1LGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAMAGEPT------EDQYHIARVISDVWLSNLLAWLTRR---------ASATDVSKRLDLAVRLLQD-
2PROSPECT22fbqA0.0770.9701.221threading_2AQ----SETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHFGSKKALIQAVFSRFLGPFCASLEKELDRRQAQHATLEDLLHLLVSQAMALSIFMRLLGLAFSQSQGHLRKYLEEVYGKVFRRYMLLV--NEAAPKLPPIELFWRVHFMLGAAAFSMSGIKALRAMAETDFTEQVMHLMVPFFAAGMRESGID
3PPA-I3mnlA0.0900.9351.001threading_3LGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAMA-----GEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIGDQD--------
4SPARKS2gena0.1080.9201.068threading_4--------RKDEILQAALACFSEHGVDATTIEIRDRS-GASIGSLYHHFGNKERIHGELYLAGIGQYAALLEAGFARARSAEETVRLLVTSYIDWVVNPDWARFILHSRGRVEAGELGERLRADNQAHFARIHAALAGYRAEGLFREPDDCFASVVIGPAHDLARQWLAGRTRVALADCRELLAQVAWDSVRAA-------
5PROSPECT21t33A0.0870.9701.190threading_5MNITKGEQAKSQLIAAALAQFGEYGLHAT-TRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLHTHLTRLVAAYTG-----CDANDTRMILHTHALLGEVLAFRLGKETILLRTFDEEKAELIYQTVTCHIDLILHGLTQ
6SPARKS2hyja0.0970.9201.039threading_6---AEAQATRGRILGRAAEIASEEGLDGITIGRLAEELEMSKSGVHKHFGTKETLQISTLDKAFVDFWHRVVEPALAEPPGLRRLRAVCANSVGYLEEGGCLLTAALSEYDGRPGRVRDAVAEVWSRWREQLRADL-TAAVDKGELPAVEQALFEIVAAGLALNAAMQLQHDR------------TAADRARRAIERALAQ
7PROSPECT22bkuB20.0901.0001.127threading_7TISTFVMDKLGQTMDMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAQATKDTQKRQLSL
8SPARKS1pb6a0.0890.9451.034threading_8----AVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKA-FREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVT------GATLRDEVFFNQTVENVQRI
9PROSPECT22rd3A0.0620.9551.103threading_9DPYQNAQSIWGDCISPFVQGIGRGTLERDKFRFY-----IIQDYLFLLEYAKVFALGVVKACDEAVMREFSNAIQDILNNEMSIHNHYIRELQKELQNKSYTSYMLAEGFKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNALEHASSKEFQACVNWNINLLDSLTLASSK----QEIEKLKEIFITTSEYEYLFWDMAYQS
10SPARKS2nx4a0.0900.9401.022threading_10VPLVDHDERRRSITAAAWRLIAARGIEAANMRDIATEAGYTNGALSHYFAGKDEILRTSYEHISEATDRRIAEALGDATGLD-ALRILCREVMNEEQLLEARIAASLWPRAMYDEQMAATNRRTMDNWREQMAIFLEQAREEGSVGDIDVTIVVEQLLNMMMGMQILGVLTPGET-----------SSERQLEMLEQFVAA

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.684 to 2np5A
SCOP code=a.4.1.9
TM-score=0.905 to 2fbqA
SCOP code=a.4.1.9
TM-score=0.686 to 2hkuA
SCOP code=a.4.1.9
TM-score=0.948 to 2genA
SCOP code=a.4.1.9
TM-score=0.760 to 1t33A
SCOP code=a.4.1.9