Template-based Modeling Results for YNAI_ECOLI

Submitted Primary Sequence

>Length 343
MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPEQGR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPEQGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEEEEEEEEEEECCCCCEEEEECHHHCCCEEEECCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPEQGR
4122101100000000000000000011013313333320001001000000000000000110011110210010001000000000000000110021012112432232200300120010000000000002201010100000000000000000120011000000000221021010020133102010110000001011231210000102002110110142211101020001121121011003002200441321234420100011014000000000002222122002002100120020033230300001010102422335438
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPEQGR
1	PROSPECT2	1m5ya	0.089	0.886	1.588	threading_1	VVDGLMQSVKLNAQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVTELNLSHILSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGP-------IRSGVGFHILKVNDLRGE---------------SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTNKGQMSAPVHSSFGWHLIELLDTRNVDRAYRMLKFSEEAASWMQEQRASAYVKIL-----------------S
2	MUSTER	2vv5A	0.211	0.746	2.982	threading_2	-------------------------------------------------------------------------LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLG--GVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDS--DIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSG---DLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV-------
3	PROSPECT2	1txdA	0.074	0.872	1.515	threading_3	EVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSEQLHIGLNEQMKAVRIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFQTFVQDAESPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWVKKAADHCRQILNFVNQAVKEAENKQRLEDYQRRLDTSSLVEELRNLDLTKRKMIHEGPLVWKVNRDKTIDLYTL----LLEDILVLL-----QKQDDRLVLRCTFSPVIKLSTVLVRQ--------VATNKALFVISMSDNGAQIYELV----AQTVSEKTVWQDLICRMAASVKEQS-----------------------
4	PROSPECT2	1w36B1	0.064	0.997	1.485	threading_4	MATAELRGRIRSNIHELRIACLPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESLRYQACADFWRRHCDLVITRALAEIRETVAREKRRRGGFDDMLSRLDSALRSESGEVLAAAIRTRFPTDPQQYRIFRRIWHIFTYMKARSGMVNSVNKL-FSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGQAGQRGEALLMNGDDARPVRASISVLVRSRQEAAQVRDALTLYLSNRDRLESDKHLVQIVTIHKSKGLEYPLAVLDLNAAPESVDLAEAERLAEDLAGLRTCIEALCDDDIAWQTAQTGDNQPWQ
5	SPARKS	1mxma	0.217	0.741	5.265	threading_5	---------------------------------------------------------------------------YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLG--GVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDS--DIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNS---GDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV-------
6	PROSPECT2	1mxma	0.217	0.741	3.189	threading_6	YAVNIV---------------------------------------------------------------------------AALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLG--GVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDS--DIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGD---LQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV-------
7	PPA-I	2vv5A	0.211	0.746	4.171	threading_7	-------------------------------------------------------------------------LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLG--GVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDS--DIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSG---DLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV-------
8	HHPRED-l	2vv5_A	0.203	0.746	9.269	threading_8	----------------------------------------------------------------------LSYAVNIVAALAIIIVGLIIARMISNAVNRLMIS---RKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGG--VAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYD--SDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSG---DLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV-------
9	HHPRED-g	2vv5_A	0.211	0.746	9.677	threading_9	-------------------------------------------------------------------------LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLG--GVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDS--DIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNS---GDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV-------
10	SP3	1mxma	0.217	0.741	1.252	threading_10	---------------------------------------------------------------------------YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLG--GVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDS--DIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNS---GDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV-------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.607 to 1m5yD SCOP code=a.223.1.2	TM-score=0.816 to 2vv5A SCOP code=b.38.1.3	TM-score=0.629 to 1ki1D SCOP code=a.87.1.1	TM-score=0.825 to 2vv5A SCOP code=b.38.1.3	TM-score=0.364 to 3pjrA SCOP code=c.37.1.19