Template-based Modeling Results for YLIJ_ECOLI

Submitted Primary Sequence

>Length 208
MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS
CEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCEEEECCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS
2010001321110210000022140201001002321223222003101201000021242100001000001000321333411141121002012000001220220010000000111343413200210031021002001210241310002200000000000000022021212311102200220241110232131334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS
1	MUSTER	3gx0A	0.261	0.957	3.446	threading_1	MIDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPPLSLFESGAILLYLAEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHF--NHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALL----
2	SPARKS	3gx0a	0.261	0.957	3.485	threading_2	MIDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPPLSLFESGAILLYLAEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFN--HAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALL----
3	PROSPECT2	3gx0A	0.261	0.957	3.747	threading_3	MIDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHGEPLSLFESGAILLYLAEKTGL--FLSHETRERAATLQWLFWQVGGLGPMLGQN--HHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALL----
4	PPA-I	3gx0A	0.261	0.957	3.494	threading_4	MIDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPALSLFESGAILLYLAEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNH--AAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALL----
5	HHPRED-l	3ein_A	0.231	0.957	1.898	threading_5	-VDFYYLPGSSPCRSVIMTAKAVGVELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVD--NGFALWESRAIQVYLVEKYGKTSLYPKCPKKRAVINQRLYFDMGTLYQSFANYYYPQVFAKAP-ADPE----AFKKIEAAFEFLNTFLEGQDYAAGDSLTVADIALVATVSTFEVAKFEISKYANVNRWYENAKKTPGWEENWAGCL-
6	HHPRED-g	3c8e_A	0.296	0.976	2.160	threading_6	PLQLYSLG-TPNGQKVTIMLEELGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHPIRVFESGSILLYLAEKFG--YFLPQDLAKRTETMNWLFWLQGAAPFLGGGF--GHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGGLDAGSYKHVQRWAKEVGERPAVKRGRIVNRT
7	SP3	3m3ma	0.242	0.933	3.476	threading_7	LYKVYGDYRSGNCYKIK-LLNLLGLPYEWQAVDILGGDTQTEAFLAKNPNGKIPVLELEDG-TCLWESNAILNFLADGSQ---FLPSEPRLRTQVLQWQFFEQYSHEPYIAVARFIQLYEGLP---EERREEYLKLHKRGYKALDVELSRTPYLVGEHYSIADIALYAYTHVADEGGFDLSRYPGIQAWQR-VQSHPRH-----VPLD
8	SAM-T99	3gx0A	0.268	0.952	3.039	threading_8	MIDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPPLSLFESGAILLYLAEKTGL--FLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTI--PYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQAL-----
9	MUSTER	1byeA	0.257	0.990	3.249	threading_9	PMKLYGAVMSWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGD--LYLFESRAICKYAARKNKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYALDAYPHVKAWWSGLMERPSVQKVAALMKP
10	SPARKS	3m3ma	0.242	0.933	3.456	threading_10	LYKVYGDYRSGNCYKIK-LLNLLGLPYEWQAVDILGGDTQTEAFLAKNPNGKIPVLELEDG-TCLWESNAILNFLADGSQ---FLPSEPRLRTQVLQWQFFEQYSHEPYIAVARFIQLYEGLP---EERREEYLKLHKRGYKALDVELSRTPYLVGEHYSIADIALYAYTHVADEGGFDLSRYPGIQAWQR-VQSHPRH-----VPLD

Predicted Tertiary Structure


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TM-score=0.873 to 1jlvA SCOP code=a.45.1.1	TM-score=0.876 to 1jlvA SCOP code=a.45.1.1	TM-score=0.873 to 1jlvA SCOP code=a.45.1.1	TM-score=0.874 to 1jlvA SCOP code=a.45.1.1	TM-score=0.872 to 1jlvA SCOP code=a.45.1.1