Template-based Modeling Results for YLAB_ECOLI

Submitted Primary Sequence

>Length 516
MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL
CCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHEEEEECCEEEECCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCHHHHHHCCCCEEEEECCHHEEEEECCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHHHHCCCHHHEEEEEEHHHHHCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCEEEECHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL
542220001100000001101100101111121221113202210220022022001202200320141312102320021002002112101100002231000011333122220131021143001000112221111100011012100000111000000121222000000112220001113300210023023222320212000000001241211000100011003223321000012000000000111220122012013201200443100000100000341200001000101112122000210000023001012002000210021002014423302000001011023330121022004223032300001002211121310020022035000100000100000000102203211010120003203122000000200330402000211212310210242203201000003102232013103423
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL
1	MUSTER	3pjwA	0.165	0.773	2.371	threading_1	--------------------------------------------AALFQEQAERSEKLRTESY---DNLTGLA--EMQLNARVSNPEQASSG--LLLLR-------RLGGQRTDELL-----------AV---------GEQLSRECAK--------YPETQNLVTRIRGGEFAVLAPGMTREALQLAQSLDSALSSLYATGATDVAAVASIGLAPFAHGDSPQAVLSLGDQALAQAEQGEQNWACLDGDD----------------HHAWHRLLDQALNQRRFELFFQPVVAAQDTLVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGH-----EESLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG----------
2	PPA-I	3pjwA	0.159	0.806	4.922	threading_2	-----------------------------------------------AALFQEQAERSEKLRTESYQDNLTGLANRRYFEMQLNARVSNP------------------EQASSGYLL----LLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECAKYPETQNLVTRIRGGEFAVLAPGMTREALQLAQSLDSALSSLYATGATDVAAVASIGLAPFAHGDSPQAVLSLGDQALAQAEQGEQNWACLDGDD----------------HHAWHRLLDQALNQRRFELFFQPVVAAQDTQVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGH-----EESLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQELFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG----------
3	SPARKS	3n3ta	0.341	0.477	5.443	threading_3	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGDDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLVT-DEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNL-STPQAADAFASLLDRQK
4	HHPRED-l	3hvb_A	0.194	0.479	4.985	threading_4	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAQRGDVIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEHRAKGHQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADASYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQVEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYDFS-----
5	HHPRED-g	3pjx_A	0.166	0.783	4.842	threading_5	------------------------------------------------------------------------------AALFQEQAERSEKLRTESYQDNLTGLANRYFEMQLNARVSNPEQ-ASS-GYLLLLRVKDLAGLNQRLGGQRTDELLLSRECAKQNLVTRIRGGEFAVLAPGMREEALQLAQSLDSALSSLYATGATDVAAVASIGLAPFA-HGDSPAVLSLGDQALAQEGQGEQNWACLD-------G---------DDHHAWHRLLDQALNQRRFELFFQPVVAAQDQLVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGHEE-----SLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDKRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG----------
6	HHPRED-g	3hvb_A	0.194	0.479	5.005	threading_6	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----------QRGDVIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEHRAKGHQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNNQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYDFS-----
7	SAM-T99	3pjwA	0.162	0.742	3.284	threading_7	------------------------------------------------------------------------------------------------------RSEKLRTESYQDNLTGLANRRYFEMQLNARVSN---------PEQASSGYLLLLRVKDLAGLNQRLGGQRDVTRIRGGEFAVLAPGMTREEQLAQSLDSALSSLYATGATDVAAVASIGLAPF-AHGDSPQAVLSLGDQALAQAEGQGEQNWACLDGDDHHAWHRLLD------QALNQRRFELFFQPVVAADTQLVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQM-----AGHEESLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQEDFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG----------
8	SP3	3n3ta	0.337	0.477	5.335	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGDDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLVT-DEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGN-LSTPQAADAFASLLDRQK
9	HHPRED-l	3pjx_A	0.160	0.773	4.685	threading_9	---------------------------------------------AALFQEQAERSE-KLRTESYQDNLTGLANRRYFEMQLNARVSNPEQASSLLLLRKDLAGLNQRLGGQRTDELL---KAVGEQLSREC-AKY-PETQNLVTRIRGGEFAVLAPGEEALQLASSTDVAAVAS-I----GLAPFAHGDSPQAVLSLGDQALAQAEGQGEQ----------NWACL--D----------------------------------GDDHHAWHRLLDQALNQRRFELFFQPVVAAQDQLVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGH----EE-SLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG----------
10	SAM-T99	3ii8B	0.343	0.475	6.470	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGDDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLVTDE-VRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHSIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNL-STPQAADAFASLLDR--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.579 to 2basA SCOP code=c.1.33.1	TM-score=0.581 to 2basA SCOP code=c.1.33.1	TM-score=0.577 to 2basA SCOP code=c.1.33.1	TM-score=0.602 to 2basA SCOP code=c.1.33.1	TM-score=0.566 to 2basA SCOP code=c.1.33.1