Template-based Modeling Results for YKGG_ECOLI


  Submitted Primary Sequence

>Length 231
MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLPEYSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLPEYSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCHHHHHCCCCEECCCCCCHHHHHHHHCCCEEEEEECEEEECCCEEEEECCCCCCCHHHCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHEEECCCCCCCEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLPEYSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC
432112012200410323232333233121221233322312232102001200131132201111222012001200432232100001123122020232023313101122231231012023030000001000011000000212331200100020000001022013202200210121132233110000000001121212001021140111000000242
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLPEYSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC
1MUSTER2g40A0.2020.7062.016threading_1---------------------------------------PLSRAEILHQFEDRILDY-GAAYTHVSAAELPGAIAKALG--NARRVIVPAGIP------APWLTVGMDVLRDEPPLS---HAELDRADAVLTGCAVAISETGTIILDHRADQGRALSLIPDFHICVVREDQIVQTVREGVEAVAASVREGRPL----TWLSGGS-----------GVHGPRRLQVIVVG--
2SPARKS2g40a0.1960.7062.998threading_2---------------------------------------PLSRAEILHQFEDRILD-YGAAYTHVSAAELPGAIAKALG--NARRVIVPA-------GIPAPWLTVGMDVLRDEPPLS--HAELDRADAVLTGCAVAISETGTIILDHRADQGRRALSIPDFHICVVREDQIVQTVREGVEAVAASVREGR----PLTWLSGGS-----------GVHGPRRLQVIVVG--
3PROSPECT22g40A0.1900.7062.583threading_3---------------------------------------PLSRAEILHQFEDRILD-YGAAYTHVSAAELPGAIAKALG--NARRVIVPAGIPAPWLT---------VGMDVLRDEPPLSHAELDRADAVLTGCAVAISETGTIILDHRADQGRALSLIPDFHICVVREDQIVQTVREGVEAVAASVR----EGRPLTWLSGGS-----------GVHGPRRLQVIVVG--
4PPA-I2g40A0.2020.7062.488threading_4---------------------------------------PLSRAEILHQFEDRILDY-GAAYTHVSAAELPGAIAKALG--NARRVIVPAGIPAPWLTVG------MDVLRDEPPLS---HAELDRADAVLTGCAVAISETGTIILDHRADQGRRLSLIPDFHICVVREDQIVQTVREGVEAVAASVREGRPL----TWLSGGS-----------GVHGPRRLQVIVVG--
5HHPRED-l2g40_A0.1900.7069.904threading_5---------------------------------------PLSRAEILHQFEDRILDYGAAYTHVS-AAELPGAIAKALGN--ARRVIVPAGIPAP-------WLTVGMDVLRDE--PPLSHAELDRADAVLTGCAVAISETGTIILDHRADQGRALSLIPDFHICVVREDQIVQTVREGVEAVAASVR----EGRPLTWLSGGS-----------GVHGPRRLQVIVVG--
6HHPRED-g2g40_A0.1840.7066.055threading_6PLSRAEILHQFEDRILDYGAAYTHVS-AA---------------------------------------ELPGAIAKALGN-ARRVIVPAGIPAPWL---TVGMDVLRDEPPL-------SHAELDRADAVLTGCAVAISETGTIILDHRADQGRRLSLIPDFHICVVREDQIVQTVREGVEAVAASVR----EGRPLTWLSGGS-----------GVHGPRRLQVIVVG--
7SP32g40a0.2090.7061.079threading_7---------------------------------------PLSRAEILHQFEDRILD-YGAAYTHVSAAELPGAIAKAL--GNARRVIVP-------AGIPAPWLTVGMDVLRDEPPLS--HAELDRADAVLTGCAVAISETGTIILDHRADQGRALSLIPDFHICVVREDQIVQTVREGVEAVAASVR----EGRPLTWLSGGS-----------GVHGPRRLQVIVVG--
8SAM-T992g40A0.2010.6883.528threading_8-----------------------------------------SRAEILHQFEDRILDYGAAYTHV-SAAELPGAIAKALG--NARRVIVPGIPAPWLTVGMDVLRDEPPLSHAE----------LDRADAVLTGCAVAISETGTIILDHRADQGRRLSLIPDFHICVVREDQIVQTVREGVEAVAASVREG----RPLTWLSG-----------GSGVHGPRRLQVIVV---
9MUSTER3cqmA20.0910.8530.594threading_9KQHLKAEKKLAEKAV--EQHTLPFKPKKGSRILIVAPYE--EQTASIEQTIHDLIKRKKISKMNFASQVFKTEHEKQVKE--ADYIITGSYVVKNDPVVNDG--VIDDTISDSSKWATVFPRAVMKA----------ALQHNKPFVLMSLRNPYDAANFEEAKALIAVYRYLQPNIPAGVMAIFGQAKPKGTLP-----VDIPSVTKPGNTLYPLG-YGPL----------
10SPARKS3ecsa0.1120.9700.758threading_10KRDKQGLRANLTSAIETLCGVDSSVAVSSGGELFLRFISCKKIIERGELFLRRISLSRGATILTHAYSRVVLRVLEAAVAAKKRSVYVTESQPDLSGKKAKALCHLNVPVTV---VLDAAVGYIEKADLVIVGAE-GVVENGGIINKIGTNQAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKYLKEEHPWVDYT--APSLITL-LFTDLGVLTPSAVSDELIKLY

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.835 to 2g40A
SCOP code=c.124.1.7
TM-score=0.839 to 2g40A
SCOP code=c.124.1.7
TM-score=0.837 to 2g40A
SCOP code=c.124.1.7
TM-score=0.835 to 2g40A
SCOP code=c.124.1.7
TM-score=0.836 to 2g40A
SCOP code=c.124.1.7