Template-based Modeling Results for NCPP_ECOLI

Submitted Primary Sequence

>Length 170
MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVY
CEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCEECCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVY
20100001312010200120023012322010100213232132221131011001210010132133000000021002110000000022222101010110201220021033231002001311213312333000000021302121001100000001112323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVY
1	MUSTER	1u5wC	1.000	1.000	4.312	threading_1	MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVY
2	SPARKS	1u14a	0.874	0.982	4.718	threading_2	AHQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQPFGSEETRAGARNRVDNARRLHPQADFWVAIEAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALGP-VSQYTGIDEIGRKEGAIGVFTAGKLTRSSVYYQAVILALSPFHNA--
3	PROSPECT2	1u14A	0.874	0.982	3.473	threading_3	AHQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQPFGSEETRAGARNRVDNARRLHPQADFWVAIEAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALGPVSQ-YTGIDEIGRKEGAIGVFTAGKLTRSSVYYQAVILALSPFHNA--
4	PPA-I	1u5wC	1.000	1.000	8.044	threading_4	MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVY
5	HHPRED-l	1u14_A	0.886	0.976	9.075	threading_5	-HQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQPFGSEETRAGARNRVDNARRLHPQADFWVAIEAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALGPV-SQYTGIDEIGRKEGAIGVFTAGKLTRSSVYYQAVILALSPFHNA--
6	HHPRED-g	1u14_A	0.886	0.976	7.835	threading_6	-HQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQPFGSEETRAGARNRVDNARRLHPQADFWVAIEAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALGPV-SQYTGIDEIGRKEGAIGVFTAGKLTRSSVYYQAVILALSPFHNA--
7	SP3	1u14a	0.874	0.982	5.788	threading_7	AHQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQPFGSEETRAGARNRVDNARRLHPQADFWVAIEAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALGPVSQ-YTGIDEIGRKEGAIGVFTAGKLTRSSVYYQAVILALSPFHNA--
8	SAM-T99	1u5wC	1.000	1.000	6.719	threading_8	MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVY
9	MUSTER	1zwyB	0.444	0.953	3.199	threading_9	VRKIIIASQNPAKVNAVRSAFSTVFPDQEWEFIGVSVPSEVADQPS-DEETKQGALNRVRNAKQRHPGAEYYVGLEAGIEENKTFAWIVES-DQQRGESRSA-CLLPPLVLERLELGD-----VDEVFGTENIKQKGGAIGLLTRHHLTRSTVYHQALILALIPFINPHY
10	SPARKS	3ipra	0.146	0.724	0.620	threading_10	MLGIVIATHGA-LSDGAKDAATVIMGATE-NIETVNLNSGDDV---------QALGGQIKTAIENVQQGDVMVDLLSAINELEP------ALQKKIFVVSGTNLPMVLEAINHQLLGTPIAEAAQAIVAQESVQAWDISM------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.986 to 1u5wC TM-score=0.985 to native SCOP code=c.51.4.3	TM-score=0.986 to 1u5wC TM-score=0.985 to native SCOP code=c.51.4.3	TM-score=0.952 to 1u5wC TM-score=0.966 to native SCOP code=c.51.4.3	TM-score=0.949 to 1u5wC TM-score=0.965 to native SCOP code=c.51.4.3	TM-score=0.986 to 1u5wC TM-score=0.985 to native SCOP code=c.51.4.3

Experimental Structure

Download 1u5wB

SCOP code=c.51.4.3