Template-based Modeling Results for YJJU_ECOLI

Submitted Primary Sequence

>Length 357
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCHHCCCCEEECCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHCHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
533222222221122223323312000002110010000000010024131220100000000000000000322020121002111233101011002223002021002100220113121002113123200000020332111102223320110010000001002110102100001100001000220142202100001022232232231132012100121032001001201211220121022022322000011232131221223220022003102200220021004102332211322232022310001212122321112112022023222344324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
1	MUSTER	1oxwC	0.157	0.821	0.981	threading_1	------------------AQLGEVTVLSIDGGGIRGIIPATILEFLEGQ-ADYFDVIGGTSTGGLLTAISTPNENNRPFAAAKEIVPFYFEHGPQIFNPSGQILG--PKYDGKYLQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTPELDAKYDISYSTAAAPTYFPPHYFVTGFNLVDGAVAVADPALLSISVNYKKLLSLGTGTTSEFDKTYTAKEAATWTAVHWLVIQK-TDAASSYTDYYLSTAFQALDSKNNYLRVALTGTTTEDDASEANELLVQVGENLLKTYEEALKRFAKLLSDRKKLRANK------------------------------------------
2	SPARKS	1oxwa	0.148	0.812	2.032	threading_2	--------------------LGEVTVLSIDGGGIRGIIPATILEFLEGQLQEDFDVIGGTSTGGLLTAISTPNENNRAKEIVPFYFEHGPQIFNPSGQILGPKYDGKYL-QVLQEKLG-----ETRVHQALTEVVISSFDIKTNKPVIFTKSNDAKYDISYSTAAAPTYFPPTNTSNGFNLVDGAVATVLSISVATRLNYKKLLLSLGTGTTSEFDKTYTAKEAATWTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKNNYLRVQENALTGTTTEDDASEANELLVQVGENLYEEALKRFAKLLSDRKKLRANKA-----------------------------------------
3	PROSPECT2	1oxwa	0.132	0.804	2.067	threading_3	LGEVT--------------------VLSIDGGGIRGIIPATILEFLEGQLQEDFDVIGGTSTGGLLTAISTPNENNRPFAAAKEIVPFYFEHGPQIFNPSGQILGPKYVLQEKLGETR--------VHQALTEVVISSFDIKTNKPVIFTKSNLAKYDISYSTAAAPTYFPP-HYFVTNTSNGDEYTVADPALLSISLNYKKLLLSLGTGTTSEFDKTYTAKEAATWTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKNNYLRVQENALTGTTTEDDASEANELLVQVGENLLEEALKRFAKLLSDRKKLRANK-----------------------------------------A
4	PPA-I	1oxwC	0.142	0.826	1.423	threading_4	------------------AQLGEVTVLSIDGGGIRGIIPATILEFLEGQLADYFDVIGGTSTGGLLTAISTPNENNRPFAAAKEIVPFYFEHGPQIFNPSGQILGP--KYDGKYLQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTPELDAKYDISYSTAAAPTYFPPTNTSNGFNLVDGAVTVADPALLSISVNYKKLLLSLGTGTTSEFDKTYTAKEAATWTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKNNYLRVALTGTTTEDDASEANELLVQVGENLLKKYEEALKRFAKLLSDRKKLRANK------------------------------------------
5	HHPRED-l	1oxw_A	0.153	0.770	6.839	threading_5	-------------------LGE-VTVLSIDGGGIRGIIPATILEFLEGQLQEYFDVIGGTSTGGLLTA-ISTPNENNRPFAIVPFYFGPQIFNPS-GQILGPKYDGKYL-QVLQEKLG-----ETRVHQALTEVVISSFDIKTNKPVIFTKSNAK-YDISYSTAAAPTYF-PPHYFVTNNLVDGAVAVADPALLSISVNYKK-LLLSLGTGTTSEFTYTAKEAVHW-L-----VIQK-TDAASY-TDYYLSTFQALDSKNNYLRVQENALTTTE-DDASEAN-ELLVQVGENLLKEALKRFAKLLSDRKKLRANKA-----------------------------------------
6	HHPRED-g	1oxw_A	0.153	0.768	6.379	threading_6	---------------------LGETVLSIDGGGIRGIIPATILEFLEGQLQE-FDVIGGTSTGGLLTA-ISTPNENNRPFAAAKEIVPFYFEHPQIFNILGPKYDGKYL-QVLQE-----KLGETRVHQALTEVVISSFDIKTNKPVIFTKSNAK-YDISYSTAAAPTYFPP-HYFVTNTLVDGAVAVADPALLSISLNYKK-L-LLSLGTGTTSEFKTYTTAVHW---LVIQK-TDAASSY---TDYYLSTAQALDSKNNYLRVQENALTTTE-DDASEAN-ELLVQVGENLLKEALKRFAKLLSDRKKLRANKA-----------------------------------------
7	SP3	1oxwa	0.164	0.804	0.444	threading_7	---------------------LGETVLSIDGGGIRGIIPATILEFLEGQLQEDFDVIGGTSTGGLLTAISTPNENNRAKEIVPFYFEHGPQIFNPSGQILGPKYDGKYL--QVLQEKLGET----RVHQALTEVVISSFDIKTNKPVIFTKSNDAKYDISYSTAAAPTYFPPFVTNTSFNLVDGAVADPLSISVATRLAQKLLLSLGTTTSEFDKTYTAKEAATWTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKN--NYLRVQENATTTEDDASEANELLVQVGENLPETYEEALKRFAKLLSDRKKLRANKA-----------------------------------------
8	SAM-T99	1oxwC	0.189	0.563	1.323	threading_8	-----------------------VTVLSIDGGGIRGIIPATILEFLEGQADY-FDVIGGTSTGGLLTAISTPNENNRPFAAAKEIVPFYFEHGPQIFNPSGQILGPKYDGKYLVLQEKLGETRV---HQALTEVVISSFDIKTNKPVIF--TKSNLYDISYSTAAAPTYFP-PHYFNGDEYVDGAVATV--------------------------DPALLSISVATRLAQKDPATYEEALKRF------------------------------AKLLSDRKKLRANK----------------------------------------------------------------------
9	MUSTER	1fmjA	0.090	0.840	0.619	threading_9	---PFPYEFRELNPLVKANLGAFPTTYVKLG---KGYPYLKDAANIYNMPLRPTDVFVASGTTMTQELVWLIENDLNAKTYMSLRYIYLDGFMIYDPEKQEEYNDI------LPNPENLDMERYLGLLEYSRPGSSLLAAVPPTEKRFVK-------------THLPLSLMPPNMLDTVKMVY--ARD--PRDVAVS------SFHHARLLYLLNKQSNFKDFWEMFHRGLYTLT---------PYFEHVKEAWAKRHDPNMLFLF-------DYLKDLPGCIARIADFLKKLSEEQIQRLCEHLN--EKFKNNGAVNMED----YREIGILADGEHFIRKGKAGCWRDYFDEEMTK
10	SPARKS	1ni5a	0.091	0.894	0.818	threading_10	----------STLTLNRQLLTSRQILVAFSGG-LDSTVLLHQLVQWRTENPGVALRAIHVHHG-------LSANADAWVTHCENVCQQ---WQVPLVVERVQLAQEGLGIEAQARQ-----ARYQAFARTLLPGEVLVTAQHLDETFLLALKRGSGPAGLSA--------AEVSEFAGTRLIRLARTRGELVQWARQYDLR--WIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQSPQGTLQIVPLASDAAIIRRWLAQNAPPSRDALVRIWQEVALAR--EDASPCLRLGAFEIRRYQWIKSVTGQSENIVPWQTWLQPLELPAGL

Predicted Tertiary Structure


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TM-score=0.796 to 1oxwC SCOP code=c.19.1.3	TM-score=0.806 to 1oxwC SCOP code=c.19.1.3	TM-score=0.796 to 1oxwC SCOP code=c.19.1.3	TM-score=0.752 to 1oxwC SCOP code=c.19.1.3	TM-score=0.806 to 1oxwC SCOP code=c.19.1.3