Template-based Modeling Results for YJJQ_ECOLI


  Submitted Primary Sequence

>Length 241
MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS
CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS
5432202100000301000200220042223201000101231110132230000000010113322100200110143134010000002221200010020302000012321310030011022323300220011013313322332220121112002100321103200220420321021011100420303110100100120212412311112232232322323322244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS
1MUSTER1a04A0.1820.8422.722threading_1----EPATILLIDDHPMLRTGVKQLISM-APDITVVGEASNQGIELAESLDPDLILLDLNMPGMN---GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL---ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF---------------------------
2SPARKS3c3wa0.1500.8553.717threading_2M-----VKVFLVDDHEVVRRGLVDLLGA-DPELDVVGEAGSVAEAMARVARPDVAVLDVRLPD---GNGIELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGRSLLDNRAAAALMAKLREKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSR--------------------------
3PROSPECT21a04a0.1820.8423.256threading_3----EPATILLIDDHPMLRTGVKQLI-SMAPDITVVGEASNGEIELAESLDPDLILLDLNMPG---MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAAS---LERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI---------------------------F
4PPA-I1a04A0.1770.8423.723threading_4----EPATILLIDDHPMLRTGVKQLISM-APDITVVGEASNGEQGIELALDPDLILLDLNMPG---MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLE---RDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF---------------------------
5HHPRED-l1a04_A0.1780.8382.804threading_5----EPATILLIDDHPMLRTGVKQLISMA-PDITVVGEASNGEQGIELSLDPDLILLDLNMPGMN---GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAAS----ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI---F------------------------
6HHPRED-g3c3w_A0.1460.8552.694threading_6-----MVKVFLVDDHEVVRRGLVDLLG-ADPELDVVGEAGSVAEAMVPAARPDVAVLDVRLPD---GNGIELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGRSLLDNRAAAALMAKLRGKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSR--------------------------
7SP33c3wa0.1500.8553.704threading_7M-----VKVFLVDDHEVVRRGLVDLLG-ADPELDVVGEAGSVAEAMARVARPDVAVLDVRLPD---GNGIELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGRSLLDNRAAAALMAKLREKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSR--------------------------
8SAM-T991a04A0.1820.8423.134threading_8----EPATILLIDDHPMLRTGVKQLISMA-PDITVVGEASNQGIELAESLDPDLILLDLNMPG---MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLERDVN---QLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF---------------------------
9MUSTER1rnlA0.1870.8222.653threading_9----EPATILLIDDHPMLRTGVKQLISM-APDITVVGEASNQGIELAESLDPDLILLDLNMPGMN---GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLQ--------LTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF---------------------------
10SPARKS1a04a0.1770.8423.524threading_10----EPATILLIDDHPMLRTGVKQLIS-MAPDITVVGEASNGEQGIELALDPDLILLDLNMPG---MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLE---RDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF---------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.912 to 1a04A
SCOP code=a.4.6.2		 TM-score=0.907 to 1a04A
SCOP code=a.4.6.2		 TM-score=0.540 to 2tmyA
SCOP code=c.23.1.1		 TM-score=0.907 to 1a04A
SCOP code=a.4.6.2		 TM-score=0.911 to 1a04A
SCOP code=a.4.6.2