Template-based Modeling Results for YJJK_ECOLI

Submitted Primary Sequence

>Length 555
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK
CCCEEEEEEEEEEECCCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCEECCCCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCHHCCCCCCCHHHHHHCCCCEEEECCEEEEHHHHHHHHCCCHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK
432100202200210223320021010002311100000111101000010001223213020102330200002321323333201200120023012003201300221232323023002101201210233201201010130031040232313022012101110000100133110000110121000200100130033030000000001100120011001011010011301021002112331232113221233103301210220131222213211220221122334433321101023133112200102201211221100210001024010000002100010000100112321330201003201000012223213322101210221121021232211012000301130222223122012121000100100222100000110122011300300120034030000000001100120011000022202011021102201211232112323233323233224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK
1	MUSTER	2ix8A4	0.275	0.787	2.342	threading_1	EGEDLCNCE-FSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTLRAIANGQVDGFPT----QEECRTVYVEHDIDTHSDTSVLDFVFE-------------------------------------------SGVGTKEAIKDKLIEFGFTDEIAPISALSGGWK-KLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSNTDLE--FKFPEPGYLEGVKTKQ---KAIV------------KVTNE--------------------FQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAAHIESDKTPSEYIQVDKEALASGQFRPLIEEHCSLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAVK-DGRTPSGH-N-----------------------------
2	SPARKS	2iwha	0.280	0.784	6.369	threading_2	EGE-DLCNCEFSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTLMRAIANGQVDGFP---TQEECRTVYVEHDDGTHSDTSVLDFVFE-------------------------------------------SGVGTKEAIKDKLIEFGFTDIAMPISALSGGWKMKLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSN-------------------------------------TDLEFKFPEPG-YLEGVKTKQKAIVKVTNMEFQYTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHHLDKTPSEYIQWGEDIFKIEGTRKEIEEHCSMLGLDPEIVSSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAVK-DGRMTP---------------------------------
3	PROSPECT2	2iw3A	0.276	0.782	3.459	threading_3	DEGEDLCNCEFSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTLRAIANGQVDGFPT----QEECRTVYVEHDIDTHSDTSVLDFVFE-------------------------------------------SGVGTKEAIKDKLIEFGFTDEIAPISALSGGW-KKLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSNTDLE--FKFPEPGYLEGVKTKQKA-----------------------------------IVKVTNEFQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHHLDKTPSEYIQEANKIFKIEGTPRRIEEHCSLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAVKDGR-----------------------------------TP
4	PPA-I	2ix8A4	0.260	0.789	6.441	threading_4	DEGEDLCNCEFSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTLRAIANGQVDGFPT----QEECRTVYVEHDIDTHSDTSVLDFVF-------------------------------------------ESGVGTKEAIKDKLIEFGFTDEIAPISALSGGWK-KLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELS-------------------------------------NTDLEFKFPEPGYLEGVKTKQKAIVKVTNEFQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHHLDKTPSEYIQWDKEALASGQFRPLIEEHCSLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAV-KDGRTPSGHN------------------------------
5	HHPRED-l	2iw3_A	0.280	0.771	2.795	threading_5	DEGEDLCNCEFSLAYG-AKILLNKTQLRLKRARRYGICGPNGCGKSTL-RAIANGQVD--GFP-TQEECRTVYVEHDIDTHSDTSVLDFVFE-------------------------------------------SGVGTKEAIKDKLIEFGFTD---PISALSGGWK-KLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKA-------------------------------------YEELSNTDLEFKF-PEPGYLEGVKTKQKAIVKVTN-EFQYPGKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFASHLDKTPSEYIQWRFQGQFRPLTRKEIEEHCS-LGLDPEIVHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAVKDGR-TP----------------------------------
6	HHPRED-g	2iw3_A	0.290	0.764	2.641	threading_6	DEGEDLCNCEFSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTL-RAIANGQVD--GF-PTQEECRTVYVEHDIDTHSDTSVLDFVFESG----------------V-GT----------KEAIKDKLIEFG--------------FTDE----PISALSGGWK-KLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKA-------------------------------------YEELSNTDL------EFKFPEPGKTKQKAIVKVTN-EFQYTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHILDKTPSEYIQTGEDRLASGQFRPEIEEHCS-LGLDPEVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAV-KDGR-TP---------------------------------
7	SP3	1yqta	0.245	0.861	5.759	threading_7	-------EEDCVHRYGVN--AFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNE---------------LQNYFEKLKN-GEIRPVVKPQYVDLIPKA----VKGKVIELLKKADETGKLEEVVKALELENLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLGKSVLVVEHDLAVLDYLSDIIHVVYGE-----PGVYGIFSQPKGTRNGINEFL----RGYLKDENVRFR--------------------------PYEIKFTKTGERVEIERETLVTYPRLVKDYGSFRLE-VEPGEIKKGEVIGIVGPNGIGKTTFVKLA-GVEEPTEGKIEWD--LTVAYKPQYI-KADYEGTVYELLS------KIDASKLNSNFYKTKPLGIIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKTALVVEHDV-LIDYVSDRLV-FEGEPGKYGRALPPGREGNRFLASIGPDTGRPRKDREQKEKG
8	SAM-T99	2ix8A4	0.272	0.787	3.933	threading_8	--GEDLCNCEFSLAY-GAKILLNKTQLRLKRARRYGICGPNGCGKSTLRAIANGQ---VDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFESGVGTKEAI-------------------------------------------KDKLIEFGFTDEIAPISALSGGWKK-LALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSNTDLEFKFPE-----PGYLEGVKTKQKAIVKVTNEFQYPGTSKPQ--------------------------------ITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHTDRANVAEVDKEALASGQFPLTRKEIEEHCSLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEF-------------------------------TKNLTEEVWAVKDGRTPSGHN
9	MUSTER	3bk7A	0.249	0.881	2.260	threading_9	NAISIVNLEDCVHRYGVNA-FVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVIRAFRG----NELQNYFERLKNG------------EIRPVVKPQYVDLLPKAVK-GKVRELLKKVDEVG---KFEEVVKELELENLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGE-----PGVYGIFSKPKGTRNGINEFLQG---------------YLKDENVRFRPYEIRFTKLSERVDVERE---------------TLVEYPRLVKDYGSF-KLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT--VAYKPQYI-KAEYEGTVYELLSKI------DSSKLNSNFYKTELLKPIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEGRALPPMGMREGMNRFLASRRDPDSGRPRANKEGSKDR
10	SPARKS	1yqta	0.254	0.843	6.044	threading_10	-------EEDCVHRYGVNA--FVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLC--------------------GDNDSWDGVIRAFRELQNYFEKLKEIRPVVKPQYVDLIPKAVK-GKVIELLKKADE---TGKLEEVVKALELENLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLEGSVLVVEHDLAVLDYLSDIIHVVYGE-----PGVYGIFSQPKGTRNGINEFL----RGYLKDE--------------------------NVRFRPYEIKFTKTGERVEIERETLVTYPRLVKDYGSFRLE-VEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWD--LTVAYKPQYI-KADYEGTVYELLS------KIDASKLNSNFYKTELLKPIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKTALVVEHDV-LIDYVSDRLV-FEGEP------GKYGRALPPGREGNRFLASIGITFRRDPDTG

Predicted Tertiary Structure


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TM-score=0.543 to 1b0uA SCOP code=c.37.1.12	TM-score=0.538 to 1b0uA SCOP code=c.37.1.12	TM-score=0.552 to 1g6hA SCOP code=c.37.1.12	TM-score=0.550 to 1g6hA SCOP code=c.37.1.12	TM-score=0.540 to 1b0uA SCOP code=c.37.1.12