Template-based Modeling Results for YJJI_ECOLI

Submitted Primary Sequence

>Length 516
MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCCEEECCCHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
453333321122013003132012211110001103221221301230230023100010022101121200022002003311310323203102100000000020011012010100100100211033123310111021001101210120000010112212001000200220331111000101331013200110020002012120010100031013211000001100211311000010103100231321220022002200200010011102100210211100100321013332001000000001001100323222231142120120012002101300330223202322000212200111221011020111320100110111010020021000000201320330030012002000301121000001121001000000201202323332222101100220032021122222213233324235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
1	MUSTER	3pflA	0.188	0.909	1.481	threading_1	MIEGSCKAYDPMIKKIFTEYRKTHNQGVFDV------------YTPDILRCRKSGVL---TGLPDAYGRGRIIGDYRRVALYGYGYDISGPATNAQEAIQWTYFGYLAVKSQNGAAMSFGRTSTFLDVYIEKITEQEAQEMVDHLVMKLDELFSGDPIWATMGLDGTKNSFRFLNTLYTMGPPEPNMTILWSEK-LPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQQFFGARANLAKTMLYAKGVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE---ASLMA--LHDRDVIRTMCGIAGLSVAADSLSAIKGEYPQFGNNPRVDDLAVDLVERFMKKIQKLHTYRDTQSVLTITSNVVYGKKTGNTPDGRFGPGANPGAVASLTSVAKLFAYAKDGISYTFSIVPDDEVRKTNLAGLMDGYFHEGGQHLNVNVMNRETIRVSGYAVRFNSLTKEQQQDVITRT---------------------FTQSM-----
2	SPARKS	1cm5a	0.182	0.915	6.248	threading_2	IPFGIEGSCKPMIKKIFTEYRKTHNQGVFDV------------YTPDILRCRKSGVLTGLPDAYGRYGIDYLMKDKLAQFTSLYGYDISGPATNAQEAIQWTYFGYLAAKSQNGAAMSFGRTSTFLDVYIEKITEQEAQEMVDHLVMKLRMVRDELFSIGGMGLDGTLVTKNSFRFLNTLYTPEPNMTILWSEKL-PLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIAAAVSPMIVGKQQFFGARANLAKTMLYAINVMERMDHFMDWLAKQYITALNIIHYMHDKYSY--EASLMA---LHDRDVIRTMAGIAGLSVAADSLSAIKGEYPQFGNNDRVDDLAVDLVERFMKKIQKLHTYRDTQSVLTITSNVVYGKKTGNTPDGRFGPGANPGAVASLTSVAKLFAYAKDGISYTFSIVPNALGKKTNLAGLMDGYFHEGGQHLNVNVMNRETIRVSGYAVRFNSLTKEQQQDVITRTFTQSM--------------------------
3	PROSPECT2	1cm5a	0.158	0.934	2.112	threading_3	SATEATTTLWDKVMEGVKNKQLEPFGGIKMIEGSCKAYNRELDYTPDILRCRKSGVLTGLPDAYGRG---RIIGDYRRVALYGIDYLISGPATNAQEAIQWTYFGYLAAVKSQNAAMSFGRTSTFLDVYIGKITEQEAQEMVDHLVMKLTPEYDELFSGDPIWALVTKNSFRFLNTLYTMGPPEPNMTILWSEK-LPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIAAAVSPMIVGKQQFFGARANLAKTMLYALNYDEVMDHFMDWLAKQYITALN-IIHYMHDKYSYEASLMALHDRDVIRTMA---CGIAGLSVAADSLSAIKGEYPQFGNNPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKFAYAKDGISYTFSIVPNALGKKTNLAGLMDGYFHHGGQHLNVNVMNRETIRVSGYAVRFNSLTKEQQQDVI--------------------------TRTFTQSM
4	PPA-I	1h7aA	0.172	0.845	3.365	threading_4	--------------------SRVFPTQRDLMAGIVSKHIAKNMVPSFIMKAHESGIIHVHDIDYSPALPFCCLVDLKGMLENGLGNAQIETPKSIGVATAIMAQITAQVASHQYGGTTFANVDKVLSPYVKRKTEKDVYDAFQAYEYEVNTLFSSNFVTITFGTGTDWTERMIQKAILKNRPIFPKLVMFVYKDDPNYDIKQLALECASKRMYPDIISAKNNKAITGSSVVSPMGCRSFLSVGRNNLGVVTLNLPRIALDSYIGEQKFVELFNERMDLCFEALMCRISSLKGVKA-TVAPILYQEGLFKNGRSSVSLGYIGIHELNILVGR---------------DIGREILTKMNAHLKQWTERTGFAFSLYYGSVKDVTDKGWYTNSFHVSVEENITPFEKISREAPYHFIATGGHISYVEL-PDMKNNLKGLEAVWDYAAQ-HLDYFGVNMPETDIRRTCAYLGNPNERG------------------------------------------
5	HHPRED-l	1h16_A	0.175	0.909	6.710	threading_5	IPFGGIKMIEPMIKKIFTEYRKTHNQGVF------------DVYTPDILRCRKSGVLTGLPDAYGR--G-RIIGDYRREMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKQNGAAMSFGRTSTFLDVYIERITEQEAQEMVDHLVMKLRMVRDPIWATESIGGMVTKNSFRFLNTLYTMPSPEPNMTILWSEK-LPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFARANLAKTMLYAINVMERMDHFMDWLAKQYITALNI-IHYMHDKYS--YEASL--MALHDRDIRTMACGIAGLSVAADSLSAIEGEYPQFGNNDRVDDLAVDLVERFMKKIQKLHTYRDAQSVLTITSNVVYGKKTGNTPDGRFGPGANPGAVASLTSVAKLFAYAKDGISYTFSIVPNALGKDDNLAGLMDGYFHHGGQHLNVNVMNRETIRVSGYAVRFNSLTKEQQQDVITRTFTQSM--------------------------
6	HHPRED-g	1h16_A	0.180	0.917	7.761	threading_6	MIEGSCKELDPMIKKIFTEYRKTHNQGVFD------------VYTPDILRCRKSGVLTGLPDAYGDYRRREEIAEQHKEMAAKYGYDISGPATNAQEAIQWTYFGYAAVKSQNGAAMSFGRTSTFLDVYIERITEQEAQEMVDHLVMKLRRTPDELFSGGGMGLDGRLVTKNSFRFLYTMPSPEPNMTILWSEK-LPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKMQFFGARANLAKTMLYAINDEKLKMQVGPKSAKQYITAL-NIIHYMHDKYSYEASLMALHDRDVIR---TMACGIAGLSVAADSLSAIEGEYPQFGNNPRVDDLAVDLVERFMKKIQKLTYRDAIPTVLTITSNVVYGKKTGNTPDGRFGPGANPGAVASLTSVAKLFAYAKDGISYTFSIVPNALGKDDNLAGLMDGYFHEGGQHLNVNVMNRETIRVSGYAVRFNSLTKEQQQDVITRTFTQSM--------------------------
7	SP3	1cm5a	0.165	0.940	6.156	threading_7	IPFGIEGSCKPMIKKIFTEYRKTHNQGVFDVTPDILRCRKSGVLTDYLMKDKLAQFLQADLENGVNLEQQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAKSQNGAAMSFGRTSTFLDVYIERITEQEAQEMVDHLVMKLRMVRDELFSIGGMGLDGTLVTKNSFRFLNTLYTPEPNMTILWSEKL-PLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIAAAVSPMIVGKQQFFGARANLAKTMLYAINEVMERMDHFMDWLAKQYITALNIIHYMHDKYSY-EASLMA---LHDRDVIRTMAGIAGLSVAADSLSAIKGEYPQFGNNDRVDDLAVDLVERFMKKIQKLHYRDAIPTQSVITSNVVYGKKTGNTPDGRFGPGANPGAVASLTSVAKLFAYAKDGISYTFSIVPNALGKKTNLAGLMDGYFHEGGQHLNVNVMNRETIRVSGYAVRFNSLTKEQQQDVITRTFTQSM--------------------------
8	SAM-T99	3pflA	0.169	0.849	9.465	threading_8	VNLEQTIRLREEIAEQH--------RALGQMKEMAAKYGYDISGPATNAQ----EAIQWTYFGYLAAVKS--QNGAAMSFGRTSTFLDVYIERDLKAVMKLRMVRFLRTPEYSGDPIWATES-------IGGMGLDGRTLVTKNSFRFLNT-------LYTMGPS-----------------PEPNMTILWSEKL-PLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGRANLAKTMLYAINGEKLKMQVGPKSEPIKGDVLNYDIHYMHDKYSYEASLMALHDRDVIR---TMACGIAGLSVAADSLFEIEGEYPQFGNDPRVDDLAVDLVERFMKKIQKLH---TYRDAIPTQSVLTITSNAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYDGISYTFSIVPNALGKDDNLAGLMDGYFHHGGQHLNVNVMNQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM--------------------------
9	MUSTER	2f3oA	0.155	0.938	1.373	threading_9	FPEGVGLRIINELDSLPNREMVDEEDAKVLREEIAPYWQRFPLMPDIMQILYTGSVFVLTEI----AGISHVAVNYPYLLRRGCRKVPAEKPETFWEAVQFVWLVQSALHQENYQAISMGRIDQYLYPFFKRINRELAFDILANLWIKTNEIVPATNQAVTIGGCDNELTYLMLEVTDRLRLRQPNVHVRINKG-SPESFLKRLAEAISSCNNLALFFDDAAVKALKNLNYTTDGCVEIAPFGNTSSDAALINVAKALEYALNLLEKLREQVSHIVKLVVRGSNVLSYANAEVKPTPLLSLCVEDGVDVSRGGATGIQAVGIADVGDSLVAIELQSPKYGNDDAADKYTKMVLEWYCEEVNRHRNFRGAAGCYPMTTNVGFGFFTSALPSGRLNPGVSPGVTAVINSASKLYENLPNGASLTINLSSDVLGGDAVIEALIKSSMELGVMHVQFNILKEDLVRVAGWSAYFVELSRPVQEEVIRRI---------------------SCRI------
10	SPARKS	2f3oa	0.138	0.928	6.177	threading_10	RGFRWFLEESERRIRALEESGVYEGEKYSFYQAAKI-------VSEAVINYGLR--YSKLAEELAESEDGERREELLKIAEI-CRKVPAEKPETFWEAVQFVWLVQSALQENYEQAISMGRIDQYLYPFFKRINRELAFDILANLWIKTDSLLEQYFTIGGCDIYGNELTYLMLEVTDRLRLRQPNVHVRINKGSPESFLKRLAEAISSGCNNLALFFDDAAVKALKNLNYTTDGCVEIAPFGNTSSDAALINVAKALEYALNLLEKLREQVSHIVKLVVRGSNVLSYANAEVKPTPLLSLCVEDCFKGVDVSRGGIQAVGIADVGDSLVAIELQSPKYGNDDAADKYTKMVLEWYCEEVNRHRNFRGAAGCYPMTTNVGFGFFTSALPSGRLNPGVSPGVTAVINSASKLYENLPNGASLTINLSSDVLGEDAVIEALIKSSMELGVMHVQFNILKEDLVRVAGWSAYFVELSRPVQEEVIRRIS---------CRI------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.738 to 3pflA SCOP code=c.7.1.1	TM-score=0.766 to 3pflA SCOP code=c.7.1.1	TM-score=0.704 to 3pflA SCOP code=c.7.1.1	TM-score=0.736 to 3pflA SCOP code=c.7.1.1	TM-score=0.781 to 1h7aA SCOP code=c.7.1.3