Template-based Modeling Results for YJJG_ECOLI

Submitted Primary Sequence

>Length 225
MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLNVEPGKLNEAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLNVEPGKLNEAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLNVEPGKLNEAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH
450100000011000102001001200221112122300210120021002113322121220111102100330313122002001200131021131012002103320200000112221012103302023101000003312223122300110033023023210000011011001001300010000013233324212110202103201310344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLNVEPGKLNEAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH
1	MUSTER	3qnmA	0.295	0.964	2.676	threading_1	LKYKNLFFDLDDTIWAFNARDTFEEVYQKYSFDRYDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIKSGLPHAKEVLEYLAPQYNLYILSNGFRELQSRK-RSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQ-SELRE-SLIGDSWEADITGAHGVGHQAFYNVTERTVFP--FQPTYHIHSLKELNL-LE--
2	SPARKS	3i76a	0.288	0.973	3.317	threading_2	KRYRTLLFDVDDTILDFAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGYDGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMK-----IIPTYEIRKLEELYHILNI-
3	PROSPECT2	3qnmA	0.300	0.964	3.584	threading_3	LKYKNLFFDLDDTIWAFSRRDTFEEVYQKYSFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFATKSGLPHAKEVLEYLAPQYNLYILSNGFRELQS-RKRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQS--ELRESLIGDSWEADITGAHGVGHQAFYNVTERTVFP--FQPTYHIHSLKELNLL---E
4	PPA-I	3qnmA	0.300	0.964	2.675	threading_4	LKYKNLFFDLDDTIWAFNARDTFEEVYQKYSFDRYDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIKSGLPHAKEVLEYLAPQYNLYILSNGFRELQSRK-RSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSEL--RESLIGDSWEADITGAHGVGHQAFYNVTERTVFP--FQPTYHIHSLKELNLLE---
5	HHPRED-l	1swv_A	0.194	0.987	2.207	threading_5	-KIEAVIFAWAGTTVDYGCLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPADIQEMYEEFEEILFAILPRYASPINGVKEVIASLREGIKIGSTTGYTREMMDIVAKEAALQGYKDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTV-SDMKEGRNAGMWTVGVILGSSELFVENGAHFTIETMQELESVMEH-
6	HHPRED-g	2gfh_A	0.250	0.978	1.828	threading_6	LSVRAVFFDLDNTLIDTAGASGMLEVIKLLKYHYKEEAEIICDKVQVKLSKCFH----CITDVRTSHWEEAIQETKGDAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGV-QPGDCVMVGDTLETDIQGGLNAGLKTVWINKSGRVPTSSPMPHYMVSSVLELPALLQSI
7	SP3	3qnma	0.304	0.964	3.477	threading_7	LKYKNLFFDLDDTIWAFNARDTFEEVYQKYSFDRYDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIKSGLPHAKEVLEYLAPQYNLYILSNGFRELQS-RKRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQS--ELRESLIGDSWEADITGAHGVGHQAFYNVTERTVFP--FQPTYHIHSLKELNLLE---
8	SAM-T99	3ed5A	0.280	0.969	3.553	threading_8	KRYRTLLFDVDDTILDFQAAEALALRLLFEDQNPLTNDKAQYKTINQGLWRAFEEGK-TRDEVVNTRFSALLKEYGYDGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKP-KEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCW--NPDKPNVPEIIPTYEIRKLEELYHIL---
9	MUSTER	3ed5A	0.264	0.978	2.641	threading_9	KRYRTLLFDVDDTILDFAEALALRLLFEDQNIPLTND-KAQYKTINQGLWRAFEEGK-TRDEVVNTRFSALLKEYGYDGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPKEYFNYVFER-IPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWNPDKP--NVPEIIPTYEIRKLEELYHILNEN
10	SPARKS	3qnma	0.300	0.964	3.308	threading_10	LKYKNLFFDLDDTIWAFNARDTFEEVYQKYSFDRYDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIKSGLPHAKEVLEYLAPQYNLYILSNGFRELQS-RKRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQ-SELRE-SLIGDSWEADITGAHGVGHQAFYNVTERTVFP--FQPTYHIHSLKELNLLE---

Predicted Tertiary Structure


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TM-score=0.843 to 1x42A SCOP code=c.108.1.1	TM-score=0.823 to 1x42A SCOP code=c.108.1.1	TM-score=0.833 to 1x42A SCOP code=c.108.1.1	TM-score=0.835 to 1x42A SCOP code=c.108.1.1	TM-score=0.844 to 1x42A SCOP code=c.108.1.1