Template-based Modeling Results for YJIK_ECOLI


  Submitted Primary Sequence

>Length 286
MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEECCCCCEEEEEEECHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH
5531221022000000000000000011221223032111133010002033023123201101111321100001242110010113121012010321311210100231100002233220100101342412102202021332322210200011443200000223322100202112223313123232133311232000010133421000012314100101321211000001321321333122020000132110000022110020223337
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH
1MUSTER3qqzA0.9790.8392.479threading_1---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVET-TNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGE-SLTKGSRGLSHNIKQAEGVAD-ASGNIYIVSEPNRFYRFTP----
2SPARKS3qqza0.9830.8394.632threading_2---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG-ESLTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
3PROSPECT23qqzA0.9790.8393.164threading_3---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVI-GESLTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
4PPA-I3qqzA0.9790.8393.956threading_4---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVET-TNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGE-SLTKGSRGLSHNIKQAEGVAD-ASGNIYIVSEPNRFYRFTP----
5HHPRED-l3qqz_A0.9880.8392.362threading_5---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGE-SLTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
6HHPRED-g1q7f_A0.1180.7732.103threading_6--------------------------------------IKRQRMCKFGEFGVMEGQFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEGRFKFQFGECQLLYPNRVAVVRNGDIIVTRSPTHQIQIYNQY----GQFVRKFGA-----TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-----KFGC----SKHLEFPNGVVVNDK-QEIFISDNRAHCVKVFNYEGQYLRQI---GG----EGITNYPIGVGINSNGEILIADNHNNLTIFTQDGQL
7SP33qqza0.9830.8394.455threading_7---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG-ESLTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
8SAM-T993qqzA0.9830.8399.078threading_8---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGES-LTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
9MUSTER1q7fB0.1170.8991.709threading_9FGEFGVMEGQFTEP----SGVAVNAIIVADTNNHRIQIFDKEGFKFQFECGKRDSQLLYPNRVAVVRNSGDIIVTERPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFD----QNGNVLHKFGCS----KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG---------QYLRQIGGEGITNYPIGVGINSN-GEILIADNHNNNLTIFTQDGQLISALES-------KVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLA
10SPARKS1q7fa0.1210.8992.185threading_10FGEFGVMEGQFTEP----SGVAVNAIIVADTNNHRIQIFDKEGRFKFQECGKRDSQLLYPNRVAVVRNSGDIIVTERPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIF----DQNGNVLHKFGCS----KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY---------LRQIGGEGITNYPIGVGINSN-GEILIADHNNFNLTIFTQDGQLISALES-------KVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLA

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.619 to 1uv4A
SCOP code=b.67.2.1
TM-score=0.619 to 1uv4A
SCOP code=b.67.2.1
TM-score=0.637 to 1rwiA
SCOP code=b.68.9.1
TM-score=0.638 to 1q7fB
SCOP code=b.68.9.1
TM-score=0.619 to 1uv4A
SCOP code=b.67.2.1