Template-based Modeling Results for YJHR_ECOLI

Submitted Primary Sequence

>Length 338
MGYLHIDGRGMKPNGGSRHNPLEAETIAAWLVAHKDDIERHYGEPLYKVVGVVTPFSAQVNAIKMSLRKLEINGKDEQGLLTVGTVHSLQGAERAIVLFSPVYSKHEDGRFLDSNSTILNVAVSRAKDSFLVFGDMDLIEMQPAFSPRGLLAKYLFSSDNNALQFEFQKRQDLISAHTQISTLHGVEQHDEFLNKTLAGAQKKITIISPWLSWQKVEQTGFLASMALARSRGIDITVVTDKNCNIAHVDDDKRQEKQHLLNDAVEKLNKMGIATKLVNRVHSKIVIEDEELLCVGSFNWFSATREDKYQRYDTSLVYRGEGVKNEIKAIYGSLDQRQL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGYLHIDGRGMKPNGGSRHNPLEAETIAAWLVAHKDDIERHYGEPLYKVVGVVTPFSAQVNAIKMSLRKLEINGKDEQGLLTVGTVHSLQGAERAIVLFSPVYSKHEDGRFLDSNSTILNVAVSRAKDSFLVFGDMDLIEMQPAFSPRGLLAKYLFSSDNNALQFEFQKRQDLISAHTQISTLHGVEQHDEFLNKTLAGAQKKITIISPWLSWQKVEQTGFLASMALARSRGIDITVVTDKNCNIAHVDDDKRQEKQHLLNDAVEKLNKMGIATKLVNRVHSKIVIEDEELLCVGSFNWFSATREDKYQRYDTSLVYRGEGVKNEIKAIYGSLDQRQL
CCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCEEEEEECHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHCHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCEEEEEEEHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGYLHIDGRGMKPNGGSRHNPLEAETIAAWLVAHKDDIERHYGEPLYKVVGVVTPFSAQVNAIKMSLRKLEINGKDEQGLLTVGTVHSLQGAERAIVLFSPVYSKHEDGRFLDSNSTILNVAVSRAKDSFLVFGDMDLIEMQPAFSPRGLLAKYLFSSDNNALQFEFQKRQDLISAHTQISTLHGVEQHDEFLNKTLAGAQKKITIISPWLSWQKVEQTGFLASMALARSRGIDITVVTDKNCNIAHVDDDKRQEKQHLLNDAVEKLNKMGIATKLVNRVHSKIVIEDEELLCVGSFNWFSATREDKYQRYDTSLVYRGEGVKNEIKAIYGSLDQRQL
31001130212225221330121020001001201220233123223410000001220020012003413232433322010110321222331000000010333322101222200000001023000000003003323211110000100101332102020333332122223122232233002101310320312010101212223023211121001033221101001132021221333232212300220022025121101102411110000012000000000000112211441100000113201310220122135334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGYLHIDGRGMKPNGGSRHNPLEAETIAAWLVAHKDDIERHYGEPLYKVVGVVTPFSAQVNAIKMSLRKLEINGKDEQGLLTVGTVHSLQGAERAIVLFSPVYSKHEDGRFLDSNSTILNVAVSRAKDSFLVFGDMDLIEMQPAFSPRGLLAKYLFSSDNNALQFEFQKRQDLISAHTQISTLHGVEQHDEFLNKTLAGAQKKITIISPWLSWQKVEQTGFLASMALARSRGIDITVVTDKNCNIAHVDDDKRQEKQHLLNDAVEKLNKMGIATKLVNRVHSKIVIEDEELLCVGSFNWFSATREDKYQRYDTSLVYRGEGVKNEIKAIYGSLDQRQL
1	MUSTER	2xzlA3	0.220	0.497	1.118	threading_1	MMFWANYGREEIANGTSFLNRIEAMNCERIITKLFRDG------VKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARN------TLWNHLLIHFREKGCLVE-GTLDNLQLCTVQLV-------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	1f0ia	0.121	0.956	1.439	threading_2	AALLQTPGCWGDDKCADRVGTKRLLAKGAFQDAIVAGLKESAAKGNSLKVRILGIPSKYRDKLTAKLGKAAAMTTSKTAFSWNSWKDDYLDTTHPVSDVDLAKSNIASVWFAASGNAGCMPTMHKDTNVIAVGGLGVGIKDVDPKST---------FRPDLPTASDTKCVVGLHDNTNADRDYDTVNPEESALRALVASAKGHIEISQQDLNATCRYDIRLYDALAAKMAAGVKVRIVNRGYSQIKSLSEISDTLRNRLAQQAAKTAMCSNLQLATFRSSHHKLVSVDSSTFYIGSKNL------YPSWLQDFGYIVESPEAAKQLDAQWKYSQETAT
3	PPA-I	1bysA	0.154	0.423	1.258	threading_3	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPSVQVGSPEGSARVLVLSAIDSAKTSIRMMAYSFT-----APDIMKALVAAKKRGVDVKIVIDERGNTG-----------RASIAAMNYIANSGIPLRTDSNQHDKVIIVDNVTVETGSFNF---TKAAETKNSENAVVIWNPKLAESFLEHWQDRWNQGR
4	SPARKS	2xzla	0.208	0.497	3.084	threading_4	MMFWANYGREEIANGTSFLNRIEAMNCERIITKLFRD------GVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFRE-----KGCLVEG--TLDNLQLCTVQLV-------------------------------------------------------------------------------------------------------------------------------------------------------------
5	SPARKS	1byra	0.154	0.423	1.300	threading_5	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPSVQVGSPEGSARVLVLSAIDSAKTSIRMMAYSFT-----APDIMKALVAAKKRGVDVKIVIDERGNTG-----------RASIAAMNYIANSGIPLRTDSNQHDKVIIVDNVTVETGSFNF---TKAAETKNSENAVVIWNPKLAESFLEHWQDRWNQGR
6	PROSPECT2	2xzlA3	0.202	0.497	2.011	threading_6	MMFWANYGREEIANGTSFLNRIEAMNCERIITKLFR------DGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHL----------------------------------------------------------------------------LIHFREKGCLVEGTLDN----------------------------------------------------------------------------------------LQLCTVQLV
7	PROSPECT2	2nxfA	0.103	0.864	1.333	threading_7	VQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR---------ERVQCVVQLGHNRRRDASDRALDTVAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVL----------------------------TLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLR--SHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETPPH--SHAFATAYLYEDRV-----KGRGRVEDLTI
8	PPA-I	2xzlA3	0.208	0.497	2.335	threading_8	MMFWANYGREEIANGTSFLNRIEAMNCERIITKLFRDG------VKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARN------TLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV--------------------------------------------------------------------------------------------------------------------------------------------------------------
9	PPA-I	3hsiB	0.086	0.932	1.021	threading_9	VTALYWQK----------------DEAGQEILDEIYRVKQENPHLHRAQRNLAEKSATNADWYCEQRQTYQLPDDPNFFGVPINTREVFGVLHVKGFVFTVLYSGASINNVYLHQFRYQKITINDYLLDFSAVYPLDVTNRPRTKEIRGNIRAYRKDLAQNGEYSLKSALPNVLSVSPLFGLGASGNELNQVIEDLFLQVQKKLVICTPYF----NFPRTLQHKIATLLENGKRVEIIVEQPFKAGALPYLYESNLRRFCEKFETQIESGQLVVRLWRDYHLKGVWVDDRYILLTGNNL---NPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTK
10	HHPRED-l	2gk6_A	0.201	0.470	4.853	threading_10	MFFYVTQGQEEIASGTSYLNRTEAANVEKITTKLLKA-----G-AKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVR------IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQP--LWNHLL-NYYKEQ--K-VLVE-GPLNNLRESLM----------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.500 to 1uaaA SCOP code=c.37.1.19	TM-score=0.578 to 1bysA SCOP code=d.136.1.1	TM-score=0.502 to 1uaaA SCOP code=c.37.1.19	TM-score=0.663 to 1bysA SCOP code=d.136.1.1	TM-score=0.500 to 1uaaA SCOP code=c.37.1.19