Template-based Modeling Results for YJHG_ECOLI

Submitted Primary Sequence

>Length 655
MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELDRDGILLLSTLGGLRGADGKPVALALHQGHYELDIQMKAAAEVIKANHALPYAVYVSDPCDGRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIATVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAGTSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAMTVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAFMAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADEVIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEKSAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRTGDLIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAILNARPSHQDLLPDPELPDDTRLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELDRDGILLLSTLGGLRGADGKPVALALHQGHYELDIQMKAAAEVIKANHALPYAVYVSDPCDGRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIATVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAGTSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAMTVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAFMAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADEVIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEKSAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRTGDLIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAILNARPSHQDLLPDPELPDDTRLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECHHHHCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELDRDGILLLSTLGGLRGADGKPVALALHQGHYELDIQMKAAAEVIKANHALPYAVYVSDPCDGRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIATVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAGTSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAMTVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAFMAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADEVIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEKSAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRTGDLIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAILNARPSHQDLLPDPELPDDTRLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN
5544222233232012032323233131212231123222121000000100112233142100000000012211312101111131122032003000210331311000000010010102012001000000200000021002000301000000100300000000000101000000000012113323321202100010232312231032001300010100020000000000001001000120010111122022102201200120023102022000130010000000011001000000000014030301103001201430110010112032111000003001001001102211001320000111103200221332332341332123333132331001132131322210000010100220000101102221123321110201010121131002003333032100000002013121021002000002312213200000112012112000000000101330100102300102010321201010232223133102101321222323223332223232231120010011000022210111032002103322444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELDRDGILLLSTLGGLRGADGKPVALALHQGHYELDIQMKAAAEVIKANHALPYAVYVSDPCDGRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIATVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAGTSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAMTVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAFMAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADEVIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEKSAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRTGDLIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAILNARPSHQDLLPDPELPDDTRLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN
1	MUSTER	2gp4A	0.249	0.766	2.989	threading_1	--------------------------------------------------------------HHSVVQSVTDRIIARSK-------SREAYLAALNDARNHLLKEVGSVAQVAGV--PCDGVTQGQPGE-LSLLSREVIAATAVGLS----NFDGALLLGICDKIVPGLLIGALS-FGHLPLFVPAGP----------------------GKVDRAQLLEAEAQSYHSA-GTCT--FYGQLL-----EVGLQLPGSSFVNPDDPLREALNKAAKQVCRELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELR---WVDGPTVSLDTEVLTSVATPFQN--NGGLKLLKGNLG--RAVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEIDLRHSRYGG-----------RELFGVLRSNLSSPETGARST-----SAIDELY---
2	SPARKS	2gp4a	0.237	0.766	4.005	threading_2	--------------------------------------------------------------HHSVVQSVTDRIIAR------SKASREAYLAALNDARNHLLKQEGSVAQVAGVPC--DGVTQGQPGE-LSLLSREVIAATAVGL--SHN-FDGALLLGICDKIVPGLLIGAL-SFGHLPLFVPAGPG----------------------KVDRAQLLEAEAQSYHSA-GTC--TFYGQLLE-----VGLQLPGSSFVNPDDPLREALNAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNL-THIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGGA-FLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDG---ELRWVDGPTVSLDTEVLTSVATPFQ--NNGGLKLLKGNLG--RAVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEIDLRHSRYGG-----------RELFGVLRSNLSSPETGARSTIDELY----------
3	PROSPECT2	2gp4A	0.236	0.771	4.171	threading_3	----------HHSVVQ-------------------------SVTDRIIARSKASREAYLA--------------------------ALNDARNHLLKQEVGSVAQVAGVP--------CDGVTQGQPGE-LSLLSREVIAATAVGL---SHNFDGALLLGICDKIVPGLLIG-ALSFGHLPLFVPAGP----------------------GKVDRAQLLEAEAQSYHSA--------GTCTFYGQLLEVGLQLPGSSFVNPDDPLREALNAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGHAD--INHFHAAGGAF-LIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVD---GPTVSLDTEVLTSVATPFQN--NGGLKLLKGNLGR--AVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEID-----------LRHSRYGGRELFGVLRSNLSSPETGARST--------SAIDELY
4	PPA-I	2gp4A	0.238	0.769	9.670	threading_4	--------------------------------------------------------------HHSVVQSVTDRIIARSKA------SREAYLAALNDARNHLLQEVGSVAQVAGV--PCDGVTQGQPGE-LSLLSREVIAATAVGLSH---NFDGALLLGICDKIVPGLLIGALS-FGHLPLFVPAGPG----------------------KVDRAQLLEAEAQSYHSA--------GTCTFYGQLLEVGLQLPGSSFVNPDDPLREALNKAAKQVCRELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGHAD--INHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDG---ELRWVDGPTVSLDTEVLTSVATPFQ--NNGGLKLLKGNLG--RAVIKVSAVQ------PQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEIDLRHSRYGGREL-----------FGVLRSNLSSPETGARST-----SAIDELY---
5	HHPRED-l	2gp4_A	0.257	0.760	9.701	threading_5	---HSVVQSVTDRIIAR--SKASREAYLAALNDARNH------------------------------------------------------------LLK---QEVGSVAQVAG-V--CDGVTQGQPG-ELSLLSREVIA-ATAVGLSHN--FDGALLLGICDKIVPGLLIG-ALSFHLP-LFVPAGP----------------------GKVDRAQLLEAEAQSYHSA-GTCTFYG--------LEV-GLQLPGSSFVNPDDPLREALNK-AAKQVCRLTEQYSPIGEVVNEKSIVNGIVALLATGGSTNLT-HIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPT---VSLDTEVLTSVATPFQN--NGGLKLLKGNLGR--AVIKVSAVQPQH------RVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSQDKGFKVAL-TDGR-SGASGKVAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVS----------------DTELATRTAT-EIDLRHSRG-GRELFGVLRSNLSSPETGARSTSAI-----DELY---
6	HHPRED-g	2gp4_A	0.274	0.719	3.388	threading_6	-----------------------------HSREAYL-------------------------------------------------------------LLK---QEVGSVAQVAG-V--CDGVTQGQPG-ELSLLSREVIA-ATAVGLSHN--FDGALLLGICDKIVPGLLIG-ALSFHLP-LFVPAGP----------------------GKVDRAQLLEAEAQSYHSA-GTCTFYG--------LEV-GLQLPGSSFVNPDDPLREALNK-AAKQVCRLTEQYSPIGEVVNEKSIVNGIVALLATGGSTNLT-HIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNG-HAD-INHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDG----ELRWVDPTVSLDTEVLTSVATPFQNN--GGLKLLKGNLGR--AVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSQDKGFKVAL-TDGR-SGASGKVAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTA-----TEI-------DLRHSRY-RELFGVLRSNLSSPETGARSTS-AIDEL---Y----
7	SP3	2gp4a	0.241	0.768	1.582	threading_7	--------------------------------------------------------------HHSVVQSVTDRIIA------RSKASREAYLAALNDARNHLLKEVGSVAQVAGVP--CDGVTQGQPGE-LSLLSREVIAATAVGL--SHN-FDGALLLGICDKIVPGLLIGAL-SFGHLPLFVPAGPG----------------------KVDRAQLLEAEAQSYHSA-GTC--TFYGQLLE-----VGLQLPGSSFVNPDDPLREALNKAAKQVCTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNL-THIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGHAD--INHFHAAGGA-FLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLL----DGELRWDGPTVSLDTEVLTSVATPFQ--NNGGLKLLKGNLG--RAVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEIDLRHSRYGG-----------RELFGVLRSNLSSPETGARSTS--------AIDELY
8	SAM-T99	2gp4A	0.247	0.754	8.360	threading_8	------------------------------QSVTDRIIARSKASREAYLAALNDARNHLLKQEVGSVAQVA--------------------------------------------GVPCDGVTQGQPG-ELSLLSREVIAAT--AVGL-SHNFDGALLLGICDKIVPGLLIGAL-SFGHLPLFVPAGP----------------------GKVDRAQLLEAEAQSYHS-AGTCTFYG------QLLEV-GLQLPGSSFVNPDDPLREAL-NKAAKQVCRLTELGTQYSPIVNEKSIVNGIVALLATGGSTNLT-HIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGGAFLI-KELLDAGLLHEDVNTVAGYGLRRYTQEPK---LLDGELRWVDGPTVSLDTEVLTS--VATPFQNNGGLKLLKGNLGR--AVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGFKVALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLRHS-----------------RYGGRELFGVLRSNLSSPETGARST---------------
9	MUSTER	2gp4A1	0.241	0.525	1.713	threading_9	--------------------------------------------------------------HHSVVQSVTDRIIARSK-------SREAYLAALNDARNHLLKEVGSVAQVAGVP--CDGVTQGQPGE-LSLLSREVIAATAVGLS----NFDGALLLGICDKIVPGLLIGALS-FGHLPLFVPAGP----------------------GKVDRAQLLEAEAQSYHSA-GTCT--FYGQLL-----EVGLQLPGSSFVNPDDPLREALNKAAKQVCRELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGE---LRWVDGPTVSLDTEVLTSVATPFQN--NGDLGVLRSNLSSPETGARSTSAIDELY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	2p1mb	0.080	0.806	0.670	threading_10	-PEESFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRS--------VELKGKPHFADFNLVPDGWGGYV-----YPWIEAMSSSYTWLEEIRLKRMVVT----------------------DDCLELIAKSFKNFK-VLVLSSCEGFSTDGLAAIAATCNLKELDLRESDVDDVHFPDTYTSLVSLNISCLASEVSFSALERLVTR-CPNKLNRAV---PLEKLATLLQ----RAPQGGYTAEVRPDVYSGLSVALSGCKELRCWDAVPAYLPAVYSVCSRLTLNLSATVQSYDLVKLLCQCPKLQRDYIEDAGLEVLASTCKDLLRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKD--LRRLSGLLTDKVFE-----YIGTYAKKMEMLSVAFA----GDSDLGMHHVLSGSLRK---LEIRDCPFGDKALLANASKLETMRSLWMS-------------SCS------VSFGACK----LLGQKMPKLNVEVIDERGAPDSRPESCPVERVFIYR--TVAGPRFDMPGFVWNM-------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.848 to 2gp4A SCOP code=c.8.2.2	TM-score=0.853 to 2gp4A SCOP code=c.8.2.2	TM-score=0.839 to 2gp4A SCOP code=c.8.2.2	TM-score=0.853 to 2gp4A SCOP code=c.8.2.2	TM-score=0.845 to 2gp4A SCOP code=c.8.2.2