Template-based Modeling Results for YJHF_ECOLI

Submitted Primary Sequence

>Length 449
MPLIIVVAGIALLLLLTIKIKLNTFVSLIIVSIAVAIASGMDLSKVVTSVESGLGGTLGHIGLIFGFGVMLGRLLADAGGAQRIALTMLNYFGKNKLDWAVVCSAFIVGIALFFEVGLILLVPILFAIAREAKISPMFMCVPMLSGLLVAHGFLPPHPGPTVIAREYGADVGLVLIYGIIVGIPTFILCGPVLNKFCQRIIPDAFKKEGNIASLGATRRFSESEMPGFGISFLTAMLPVILMAVVTIIQMTHAKSAADSGLFYNVILFLGNSTIAMLISLLFAIYTMGLGRGKTIPDLMDSCGKAIAGIAGLLLIIGGGGAFKQVLIDSGVGQYISTLVSGMDINPILMAWGVAAFLRICLGSATVAAISTAGLVIPLLAVHPNTNLALITLATGAGSCICSHVNDASFWMIKDFFGLTTKETLLSWTLMSTLLSISGLIFILLASLVL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPLIIVVAGIALLLLLTIKIKLNTFVSLIIVSIAVAIASGMDLSKVVTSVESGLGGTLGHIGLIFGFGVMLGRLLADAGGAQRIALTMLNYFGKNKLDWAVVCSAFIVGIALFFEVGLILLVPILFAIAREAKISPMFMCVPMLSGLLVAHGFLPPHPGPTVIAREYGADVGLVLIYGIIVGIPTFILCGPVLNKFCQRIIPDAFKKEGNIASLGATRRFSESEMPGFGISFLTAMLPVILMAVVTIIQMTHAKSAADSGLFYNVILFLGNSTIAMLISLLFAIYTMGLGRGKTIPDLMDSCGKAIAGIAGLLLIIGGGGAFKQVLIDSGVGQYISTLVSGMDINPILMAWGVAAFLRICLGSATVAAISTAGLVIPLLAVHPNTNLALITLATGAGSCICSHVNDASFWMIKDFFGLTTKETLLSWTLMSTLLSISGLIFILLASLVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPLIIVVAGIALLLLLTIKIKLNTFVSLIIVSIAVAIASGMDLSKVVTSVESGLGGTLGHIGLIFGFGVMLGRLLADAGGAQRIALTMLNYFGKNKLDWAVVCSAFIVGIALFFEVGLILLVPILFAIAREAKISPMFMCVPMLSGLLVAHGFLPPHPGPTVIAREYGADVGLVLIYGIIVGIPTFILCGPVLNKFCQRIIPDAFKKEGNIASLGATRRFSESEMPGFGISFLTAMLPVILMAVVTIIQMTHAKSAADSGLFYNVILFLGNSTIAMLISLLFAIYTMGLGRGKTIPDLMDSCGKAIAGIAGLLLIIGGGGAFKQVLIDSGVGQYISTLVSGMDINPILMAWGVAAFLRICLGSATVAAISTAGLVIPLLAVHPNTNLALITLATGAGSCICSHVNDASFWMIKDFFGLTTKETLLSWTLMSTLLSISGLIFILLASLVL
32011000000000000010100000000000000000121202200200121001000100000000000020032010012001100310133312000000000000000010000000100110033142110100000000000000000111000000420102000000000000000000000000200332123213432322221223322323232101000000000000001000311123212321101200200121000000000000000011223213201200130010000000000000002200320200200120021020100000000000010010011000000000000101222300100000000000000110100000001100102132001011000000000000000001112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPLIIVVAGIALLLLLTIKIKLNTFVSLIIVSIAVAIASGMDLSKVVTSVESGLGGTLGHIGLIFGFGVMLGRLLADAGGAQRIALTMLNYFGKNKLDWAVVCSAFIVGIALFFEVGLILLVPILFAIAREAKISPMFMCVPMLSGLLVAHGFLPPHPGPTVIAREYGADVGLVLIYGIIVGIPTFILCGPVLNKFCQRIIPDAFKKEGNIASLGATRRFSESEMPGFGISFLTAMLPVILMAVVTIIQMTHAKSAADSGLFYNVILFLGNSTIAMLISLLFAIYTMGLGRGKTIPDLMDSCGKAIAGIAGLLLIIGGGGAFKQVLIDSGVGQYISTLVSGMDINPILMAWGVAAFLRICLGSATVAAISTAGLVIPLLAVHPNTNLALITLATGAGSCICSHVNDASFWMIKDFFGLTTKETLLSWTLMSTLLSISGLIFILLASLVL
1	PROSPECT2	1jdha	0.092	0.918	2.133	threading_1	NKAAVMVHQLSMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMSVLFYAITTLHNLLLHQEGAKMGLQKMVALLNKTNVKFLAITTDCLQILQESKLIILAGPQALVNIMRTYTYEKLLWTTSRVLKVL-------SVCSSNKPAIVEAG-------GMQALGLHRLVQNCLWTLRNLSDAATKQEGM-------EGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDR--EDITEPAICALRHLTSRHQEAEMAQNAVRLLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKE--------------AAEAIEAEGATAPLTELLHTYAAAVLFRMS
2	PPA-I	1pw4A	0.089	0.873	1.148	threading_2	IDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEGFS--------RGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWH-----AALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFL--YEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG------------------------------------------WDGGFMVMIGGSILAVILLIVVM
3	PROSPECT2	1ejlI	0.097	0.853	1.974	threading_3	EDIVKGILQATQAARKLLSREKQPPIDNIIIPKFVSFLGKTDCSPIQFES-------AWALTNIASGTSEQTKAVVDGG----AIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKAIDPLLALLAVPDLGYLRNLTWTLSNLCRNKNPAPPLDAVVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGV------------------------------------------VPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDALAVFPSLLTNPKTNIQKEA------TWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLG-------ETEKLSIMIEECGGLDKIEALQRASLNLIEKYFS
4	PPA-I	3dh4A	0.130	0.922	1.115	threading_4	LAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIP----LMYSILGL-----ALFALVYSIVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSWVANLYYWGFNQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATN----LPSAANADKAYPWLTQFLPVGVKGVVFAALA---------AAIVSSLASM---LNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAP------MLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKTTSKGAIIGVVASIPFALFLKFMPLSMPLYTLLFTMVVIAFTINDDDPKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFWVLYK----
5	PROSPECT2	1ee4a	0.087	0.869	1.972	threading_5	QELQEQLSATVKFRQILSREHRPPIDVVIVVPRLVEFMRENQPEMLQLEA-------AWALTNIASGTSAQTKVVVDADAVPLFIQ-LLYTGSVEVKEQAIWALGNVAGDSTDY-RDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVR------------------------------------------IPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINVLPALRLLLSSPKENIKKEA------CWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAETKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEA--DKEARGLNINENADFIEKAGGMEKIFNCIYEKAYKIIETYF
6	PPA-I	1xm9A	0.094	0.855	1.086	threading_6	EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPN-----QNVQQAAAGALRNLVF----RSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLS-----SADAGRQTMRNYSGLIDSLMAYVQNCVAASSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKS-----KKDATLEACAGALQNLTASKG-----LMSSGMSQLIGLKEKGLPQIARLLSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNSEDILSSACYTVRNLMASQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSLQGVL-----------------------------------------
7	PROSPECT2	1b3ua	0.093	0.962	1.934	threading_7	LGVERTRSELLPFLTVGGPEYVHCLLPPLEVESLRAISHEHSPSDLEAHFVPLVKRLAGGFTSRTSACGLFSVCYPRVSSAAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELD-NVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPEDKSWTELQKAVGPEITKTDLVPAFQNLMVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHL---------LPLFLAQLKDECPEVRLNIISNLDCVNEVIG--IRQLSQSLLPAIVELAEWRVRLAIIEYMPLLAGQLGLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWA----HATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITKSLQKIGPILDNSTLQS-EVKPILEKLVKYFAQEALTVLS
8	PPA-I	2jdqB	0.091	0.860	1.075	threading_8	------------------------------------------TSDMIEMIFS--KSPEQQLSATQKFRKLLIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAG-----DSTMCRDYVLDCNILPPLLQLFSKQLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSD------------TDVLADACWALSYLSDGPAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQLQSLLHLLESIKKEACWTISNITAGRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEA--KRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAF
9	PROSPECT2	1w63A	0.098	0.980	1.887	threading_9	MPLRELIRTIQAEEREMIQKECAAIRSSFVAKLLYMHMLGYPAHFGQLECLKLIAS--QKFTDKRIGYLGAMLLLDERQDHLLMTNCIKNDLNHSTQFVQGLALCTLGCMG-----SSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPKNHGVLHTSEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKRAMELSFALVNGKELLYFLDSCECASGIFLAAEKYAPSKRWHIDTIMRVLTTYVRDDAVPNLYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQC--EEEEPIQVTEDEVLDILESVLISSVTRGYALTAIMKLST
10	PPA-I	1kpkA	0.126	0.833	1.068	threading_10	PLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTAD------NYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQRWRVLPVKFFGGLGTLGGREGPTVQIGGNIGRMVLDIFRLKGTLLATGAAAGLAAA--FNAPLAGILFIIEEMRPQF-RYTLISIKAVFIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGGTVLGTAFGMVAVELAGTFAIAGMGALLAASIRAPLTGIILVLEMTDQLILPMIITGLGATLLAQFTGGKPLYSAILARTLAKQEAEQL------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.532 to 2q6hA SCOP code=f.54.1.1	TM-score=0.733 to 1wa5B SCOP code=a.118.1.1	TM-score=0.859 to 1pw4A SCOP code=f.38.1.1	TM-score=0.886 to 1kpkA SCOP code=f.20.1.1	TM-score=0.817 to 1ialA SCOP code=a.118.1.1