Template-based Modeling Results for YJHC_ECOLI

Submitted Primary Sequence

>Length 372
MINYGVVGVGYFGAELARFMNMHDNAKITCVYDPENGENIARELQCINMSSLDALVSSKLVDCVIVATPNYLHKEPVIKAAKNKKHVFCEKPIALSYEDCVDMVKACKEAGVTFMAGHIMNFFNGVQYARKLIKEGVIGEILSCHTKRNGWENKQERLSWKKMKEQSGGHLYHHIHELDCVQHLLGEIPETVTMIGGNLAHSGPGFGNEDDMLFMTLEFPSGKLATLEWGSAFNWPEHYVIINGTKGSIKIDMQETAGSLRIGGQTKHFLVHETQEEDDDRRKGNMTSEMDGAIAYGHPGKKTPLWLASLIRKETLFLHNILCGAKPEEDYIDLLNGEAAMSAIATADAATLSRSQDRKVKISEIIKHTSVM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MINYGVVGVGYFGAELARFMNMHDNAKITCVYDPENGENIARELQCINMSSLDALVSSKLVDCVIVATPNYLHKEPVIKAAKNKKHVFCEKPIALSYEDCVDMVKACKEAGVTFMAGHIMNFFNGVQYARKLIKEGVIGEILSCHTKRNGWENKQERLSWKKMKEQSGGHLYHHIHELDCVQHLLGEIPETVTMIGGNLAHSGPGFGNEDDMLFMTLEFPSGKLATLEWGSAFNWPEHYVIINGTKGSIKIDMQETAGSLRIGGQTKHFLVHETQEEDDDRRKGNMTSEMDGAIAYGHPGKKTPLWLASLIRKETLFLHNILCGAKPEEDYIDLLNGEAAMSAIATADAATLSRSQDRKVKISEIIKHTSVM
CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCEECCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MINYGVVGVGYFGAELARFMNMHDNAKITCVYDPENGENIARELQCINMSSLDALVSSKLVDCVIVATPNYLHKEPVIKAAKNKKHVFCEKPIALSYEDCVDMVKACKEAGVTFMAGHIMNFFNGVQYARKLIKEGVIGEILSCHTKRNGWENKQERLSWKKMKEQSGGHLYHHIHELDCVQHLLGEIPETVTMIGGNLAHSGPGFGNEDDMLFMTLEFPSGKLATLEWGSAFNWPEHYVIINGTKGSIKIDMQETAGSLRIGGQTKHFLVHETQEEDDDRRKGNMTSEMDGAIAYGHPGKKTPLWLASLIRKETLFLHNILCGAKPEEDYIDLLNGEAAMSAIATADAATLSRSQDRKVKISEIIKHTSVM
201000000010002002002303301000000131022004314020011011003132010000000110012001100424110002201111231012002003412110000001111200210130044120120000101110133333311122133321000000000000000002311210000000113222221321000000020220100001000002233210000023000201123221102111323221233233333322201011322111221121332211110012101100200122231333223102021001000002100103244220202212322324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MINYGVVGVGYFGAELARFMNMHDNAKITCVYDPENGENIARELQCINMSSLDALVSSKLVDCVIVATPNYLHKEPVIKAAKNKKHVFCEKPIALSYEDCVDMVKACKEAGVTFMAGHIMNFFNGVQYARKLIKEGVIGEILSCHTKRNGWENKQERLSWKKMKEQSGGHLYHHIHELDCVQHLLGEIPETVTMIGGNLAHSGPGFGNEDDMLFMTLEFPSGKLATLEWGSAFNWPEHYVIINGTKGSIKIDMQETAGSLRIGGQTKHFLVHETQEEDDDRRKGNMTSEMDGAIAYGHPGKKTPLWLASLIRKETLFLHNILCGAKPEEDYIDLLNGEAAMSAIATADAATLSRSQDRKVKISEIIKHTSVM
1	MUSTER	3ezyA	0.248	0.887	2.685	threading_1	SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDEDRLREMKEKLGVEAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKPHVLRITSRDPA----PPPLDYIRVSGGIFLDMTIHDFDMARYIMGEEVEEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGALGVIDNSRRAVYGYQRIEVFGSKGRIFADNVRETTVVLTDE--------------------------QGDRGSRYLYFFLERYRDSYLEELKTFIKNVKSGEPPA------VSGEDGKMALLLGYAAKKSLEEKRSVKLEEVI------
2	SPARKS	3q2ia	0.205	0.879	3.395	threading_2	KIRFALVGCGRIANNHFGALEKHDRAELIDVCDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQEDAAGWRGTWEDGGAFMNQASHYVDLLDWLIGP-VESVQAYTATLAR----NIEVEDTGTVSVKWRSGALGSMNVTMLTYPKNLSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDEEIKDASGFG----------------------------HPLYYDNVIKTMRGEATP------ETDGREGLKSLELLIAMYLSARDGRRVSLP--LDY----
3	PROSPECT2	3ezyA	0.245	0.887	4.610	threading_3	SLRIGVIGLGRIGTIHAENLKMIDDAILYAISREDRLREMKEKLGVEAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKPHVLRITSR----DPAPPPLDYIRVSGGIFLDMTIHDFDMARYIMGEEVEEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGALGVIDNSRRAVYGYQRIEVFGSKGRIFADNVRETTVVLTDE--------------------------QGDRGSRYLYFFLERYRDSYLEELKTFIKNVKSGEPPA------VSGEDGKMALLLGYAAKKSLEEKRSVKLEE------VI
4	PPA-I	3ezyA	0.248	0.887	3.038	threading_4	SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDEDRLREMKEKLGVEAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKPHVLRITSRD----PAPPPLDYIRVSGGIFLDMTIHDFDMARYIMGEEVEEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGALGVIDNSRRAVYGYQRIEVFGSKGRIFADNVRETTVVLTDE--------------------------QGDRGSRYLYFFLERYRDSYLEELKTFIKNVKSGEPP------AVSGEDGKMALLLGYAAKKSLEEKRSVKLEEVI------
5	HHPRED-l	1h6d_A	0.206	0.911	2.432	threading_5	RFGYAIVGLGKYALQILPGFAGCQHSRIEALVSAEKAKIVAAEYGVDDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPN-DERFVEVEDRIIWQMRFRSGALSHGASSYSTT-TTSRFSVQGDKAVLLMDPATGYYQ-------NLISVQT---------PGH--------ANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPV------RSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYRQGGY-
6	HHPRED-g	3v5n_A	0.191	0.844	2.172	threading_6	RIRLG----G-IGAVHRIAARLDDHYELVAALSPEKAEASGRELGLRVYSDFKE-AIREAIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLTHNYTGYP-VRQARE-IENGDIGAVRLVQ-EYDWLTEN------------GGSTGDIGTHAYNLGCFVSGLELEELAADLDSFVGGR----QLDDNAHVL-RFRDGAKG-LWCSQVAPGHNL-VRVYGTKGGLEWTQKDPNYLWYTPFGEPK-------------RLLTRAAGASPARVSRIPSGHPEGYLEGFANIYSEAARAIYA---ADPSV-IYPTIDDG-RG-TFVDACVRSSERNAWIK-----------
7	SP3	3q2ia	0.199	0.879	3.548	threading_7	IIRFALVGCGRIANNHFGALEKHDRAELIDVCDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQYDAAGWRGTWEDGGAFMNQASHYVDLLDWLIGP-VESVQAYTATLAR----NIEVEDTGTVSVKWRSGALGSMNVTMLTYPKNLSITILGEKGSVRVGGVAVNEIQHWEFSE----------------------------PHAMDEEIKDASGFGHPLYYDNVIKTMRGEATP------ETDGREGLKSLELLIAMYLSARDGRRVSLP--LDY----
8	SAM-T99	3ezyA	0.259	0.882	3.199	threading_8	SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDRDRLREMKEKLGVEAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKPHVLRITSRDPAPPPLD-----YIRVSGGFLDMTIHDFDMARYIMGEEVEEVFADGSVLVEEIGKAGDV-DTAVVVLRFKSGALGVIDNSRAVYGYDQRIEVFGSKGRIFADNVRETTVVLTDEQGDRGSRYLYFFLER--------------------------YRDSYLEELKTFIKNVKSGEPPAV------SGEDGKMALLLGYAAKKSLEEKRSVKLEEVI------
9	MUSTER	3e18A	0.201	0.925	2.616	threading_9	LYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDIAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEMFHLESRVHGANGIPGD--WRHLKHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFALGDE-----VDDGFVTFITFENGITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLSGEIVKPTALAKTSEPTPIKAGQ-----GLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFVDVLNNTSEP------IVQNEEVYQVLKLIEAIFEAAETNRTVHS----------
10	SPARKS	3moia	0.188	0.946	3.380	threading_10	MIRFGICGLGFAGSVMAPAMRHHPDAQIVAACDEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQEGSVGRVSMLNCFNYTDFLYRPRRPEELDTKGGGIIYNQLPHQIDSIKTITGQRITAVRAMTGRLDP----KRPTEGNCAAMLTLEDGACAVMVYSGYDHFDSEMHFWLAEGGRAKQPNHGGARKVLRQLEGFGGPISKSDRKQPHFGVMLVTCEHYGDEGVREVPAITGRGPFSQGDTIDELRDAIAGVAPA------LRDARWGKDTLEVCLAVLESSATGRQVER----------

Predicted Tertiary Structure


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TM-score=0.783 to 1zh8A SCOP code=c.2.1.3	TM-score=0.782 to 1zh8A SCOP code=c.2.1.3	TM-score=0.839 to 1zh8A SCOP code=c.2.1.3	TM-score=0.780 to 1zh8A SCOP code=c.2.1.3	TM-score=0.780 to 1zh8A SCOP code=c.2.1.3