Template-based Modeling Results for YJGN_ECOLI


  Submitted Primary Sequence

>Length 398
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLFFVFFYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLRHQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFISTKMLPANSSSSVIISMVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRLTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGVMPSLPFL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLFFVFFYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLRHQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFISTKMLPANSSSSVIISMVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRLTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGVMPSLPFL
CCHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCEEEEEEEEEEEEEEHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCEEEECHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLFFVFFYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLRHQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFISTKMLPANSSSSVIISMVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRLTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGVMPSLPFL
54422142323121000202022001000000000000010012100010110012102021220101020010010000000000000001222122100010000000000000101112011121200100010104211101111210111110221112232122322220001000000000000000001000100100222020000202020102101200020133222211100110012001001021121322301210121143001010010000000001001001110032010221201020101020000100010001000000010001000000003111000002202123333323311000002111221324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLFFVFFYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLRHQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFISTKMLPANSSSSVIISMVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRLTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGVMPSLPFL
1PROSPECT23a0oA30.0870.8421.589threading_1GRSARHAAAQTSHPRLWLNSEQ------LSAFADAVAKDPNHCGWAEFYEKPWLERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRH----------LAIAGRVLGRDDLLDASRKWLLAVAAWDT-----------------------------------KGATSRAYNDEAGFRVVVALAWGYDWSVLLERTREVADHVIAHARIHVFPY--DSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWAGTDGGWAEGPHYWMTGMAYLIEAANLIRSYILYQRPFFQNRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDDYPQVEAVSPAD--------LP--
2PPA-I2lkgA0.1010.3471.117threading_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------MAHHHHHHAMVIDHILKCVFDKICKIGTESVEAGRLIELSQEGGGGGGPLYFV---VNVIEPCKKFSELTGLVFYTDSGEKMTESKSVLKSLTEKLKKIVELIPSTSSAVPLIGKYMLFTKEFVESSIKITEEVINTHHRS-------------------------------------------------------------------------------------------
3HHPRED-g3bvr_A0.1480.5781.232threading_3----------ANFIAEFFGHRVEAARNDQAT--------GTCPFLTAVKAE-TSRGVTAVDNERYDWLVCPNR-ALDPLFMS---AASRKLFGYGQFIAAPTLDQAVRDGIRWLDRGVLSISKTLAEVESKRYGFHGSYKHAVGAIDI-ALVEGIDFHTRAALSKKME------GPNLSNVFKRYKFALSGHAIPQSVWKSWLRHLANPTLIGDTHLEIRVNVDTLIDLALRERAALGPSGPVATFT---DK---------------VEARMLRFWPK------------------------------------------------------------------------------------------------------------------------
4PROSPECT21ee4a0.0970.9051.572threading_4MTQQLNSDD-------------MQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRE-----NQPEMLQLEAAWALTNIASAQTKVVVDADAVPLFIQLLAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDKLIYSMDTETLVDACWAISYLQEAIQAVIDVRIPKRLVELLSHES-------------TLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLKTKKEACWAISGGLQRPDIIRYLVSQGCIKPLCDLLRIIEVTLDALENILKMGEADKEARGLNINENADFIEQQNENDKIYEKAYKIIET-------YF
5PPA-I3ripA20.1360.7741.028threading_5ELHRLKQQPLF-SLVDFEQVVDRIRSTVAEHLWKLMVEES--DLLGQLKIIKDFY----LLGR-------------GELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKV-------LLDDDNLLPLLHLTIEYHGASGWAALGLSYKVQWPLHILF------------TPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKH--------LKSNQTDAIKWRLRNHMAF--LVDNLQYYLQVDVLESQFSQLLHTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVSQNLLDERGAAQLRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYY-----------------------------------------
6PROSPECT21ejlI0.0700.9351.559threading_6IVKGINSNN-------------LESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGK-----TDCSPIQFESAWALTNIQTKAVVDGGAIPAFISLISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIE--------ECGGLDKIEALQRHENEFS
7PROSPECT23a6pA10.0740.9151.534threading_7AMTVMMDPNSTCPICVPEKTQVAIVRHFGLQILEHVVKWNGMSRLEKVYLKNSVMELIANGTLNI---LEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGV--------------AALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQEL----------QLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSHYVFLKRLCQVLCALGNQLCALLGADSDV-------ETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFN
8PROSPECT21q2lA20.0850.8621.526threading_8NPSLIKSEKKYDHPELIVDESNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANNGYTQRLPQLFQALLEGYFWYNQMMDSAEKGKAFEQAIMPAQMLRDERRLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVDKKQSVIFDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVDKQPSFLWE-------------------RYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQK-----------------------------------LADFFHQAVVEPQGMASQNGKAEYVHPEGWKVWENVSALQQT-MPLMSEK
9MUSTER3a0oA0.1510.9470.682threading_9SVEPWLERPVMPEPQPYPNNLWRQMYIDCQEVIYAIRHLAILLDASRKWLLAVAAWDTK-GATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHA--RIHVFPYDSHAVRSLSAVALQGESWLDYTVEFLATLYS---PWAGTDGGWAEGPHGMAYLIEAANLIRSYIPFFQNTGRFPLYTKAPGTRANFGDDSTLGDLP-GLKLGYNVRQFAGVTGNGHY--QWYFDHIKADAAFYNYGWWDLNFDDLVYRHDYPQVLPALAVFIGWATIQKHLQFVFKSSPYGSLS-GDQ----AFVLYAHGEDL-----AIQSGYYVAFNSQMHLNWRRQTRSKNAVLIGG--KGQYAEKDKALARRAAGRIVSGHVVANPLV
10SPARKS2xwub0.1210.9120.932threading_10LMQAQVSPQAWHWQL-LQPDKVPEIQYFGASALHIKISWSDIPTDQYESLKAQLFTQIRFASGS--------KIVLTRLCVALASLALSMMPDAWPCAVADMVRLFDGQGRCLALLELLTVLPEEFQTSRL----PQYRKGL------VRTSLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAA------------LQDSELFDSSVEAIVNAIQRYVNTLLKLIPLVLQEQLRQAVQNGDMETSHGICRIAVALGENHSRALLD-QVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDILSFEAQQVYRPVYFQLVDVLLHKAQFP--SDEEYGFWSSDEKEQSDTLMYVYE-MLGALSNL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.481 to 1c9bA
SCOP code=a.74.1.2
TM-score=0.599 to 1j0nA
SCOP code=a.102.3.2
TM-score=0.433 to 1sj8A
SCOP code=a.215.1.1
TM-score=0.325 to 1vmdA
SCOP code=c.24.1.2
TM-score=0.621 to 3ck9B
SCOP code=a.118.8.6